RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 PRM3Q9NNZ6 103 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 ASIC5Q9NY37 505 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 VPS29Q9UBQ0 182 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 HS3ST3A1Q9Y663 406 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 B4GAT1O43505 415 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 ELK4P28324 431 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 CD6P30203 668 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 ZP2Q05996 745 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 CSTF3Q12996 717 aaKnown RBP16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 KRT33BQ14525 404 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 RPE65Q16518 533 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 PUS10Q3MIT2 529 aaKnown RBP16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 LCTLQ6UWM7 567 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 PROSER1Q86XN7 944 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 ZC3H7AQ8IWR0 971 aaKnown RBP16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 SH3KBP1Q96B97 665 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 DPY30Q9C005 99 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 PIF1Q9H611 641 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 SLCO1B1Q9Y6L6 691 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 A0A1W2PPV9 198 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 NPIPB8E9PQR5 432 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 PRAMEF26H0Y7S4 382 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 J3QRK9 145 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 RASGRP1O95267 797 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 JUNBP17275 347 aaPredicted RBP16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 CDH3P22223 829 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 TMED10P49755 219 aaKnown RBP16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 SRP54P61011 504 aaKnown RBP16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 YPEL5P62699 121 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 FXNQ16595 210 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 ALG11Q2TAA5 492 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 ZIK1Q3SY52 487 aaPredicted RBP16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 TMEM214Q6NUQ4 689 aaKnown RBP16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 SLC2A7Q6PXP3 512 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 ZBTB46Q86UZ6 589 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 SLC22A18ASQ8N1D0 253 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 EGLN2Q96KS0 407 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 TSSK3Q96PN8 268 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 EHD1Q9H4M9 534 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 TMEM45AQ9NWC5 275 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 ITGB1BP2Q9UKP3 347 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 PIPSLA2A3N6 862 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 SEC14L2O76054 403 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 SHMT2P34897 504 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 HSD17B2P37059 387 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 CCR5P51681 352 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 OR4D2P58180 307 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 RPS13P62277 151 aaKnown RBP16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 ZNF33BQ06732 778 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 NIPAL1Q6NVV3 410 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 NOXRED1Q6NXP6 359 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 ABI3BPQ7Z7G0 1075 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 HID1Q8IV36 788 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 RIMKLAQ8IXN7 391 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 CHPT1Q8WUD6 406 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 SMPDL3AQ92484 453 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 EFCAB11Q9BUY7 163 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 EBPLQ9BY08 206 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 NTN4Q9HB63 628 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 SPATA7Q9P0W8 599 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 TMED5Q9Y3A6 229 aa16.37■□□□□ 0.21
PCDHB17P-201ENST00000539533 TNFRSF10CO14798 259 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 SDC1P18827 310 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 ARSFP54793 590 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 FAM174BQ3ZCQ3 159 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 BROXQ5VW32 411 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 OR52E1Q8NGJ3 308 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 SNX19Q92543 992 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 SHDQ96IW2 340 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 NSMCE2Q96MF7 247 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 PALMDQ9NP74 551 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 CUEDC1Q9NWM3 386 aaPredicted RBP16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 GON4LQ3T8J9 2241 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 TRBV23OR9-2A0A075B6M9 112 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 IGHV1OR15-9A0A0B4J2B8 117 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 ACTR1BP42025 376 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 ALDH3A2P51648 485 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 ACTR1AP61163 376 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 PLIN5Q00G26 463 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 NR1D2Q14995 579 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 PAGE2BQ5JRK9 111 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 GLYATQ6IB77 296 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 C17orf64Q86WR6 236 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 LAS2Q8IYD9 372 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 DEFB119Q8N690 84 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 ITPKCQ96DU7 683 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 ING2Q9H160 280 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 BRF2Q9HAW0 419 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 INVSQ9Y283 1065 aa16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.36■□□□□ 0.21
PCDHB17P-201ENST00000539533 UPK1AO00322 258 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 BCL10O95999 233 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 RAB28P51157 221 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 DAG1Q14118 895 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 HIST2H2ACQ16777 129 aaPredicted RBP16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 ZNF542PQ5EBM4 170 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 SPANXN4Q5MJ08 99 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 HIST2H2AA3Q6FI13 130 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 XAF1Q6GPH4 301 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 FAM129CQ86XR2 697 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms