RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CSTF3Q12996 717 aaKnown RBP16.41■□□□□ 0.22
CLN6-202ENST00000538696 EIF3IQ13347 325 aaKnown RBP16.41■□□□□ 0.22
CLN6-202ENST00000538696 HIST2H2ACQ16777 129 aaPredicted RBP16.41■□□□□ 0.22
CLN6-202ENST00000538696 RFTN2Q52LD8 501 aaPredicted RBP16.41■□□□□ 0.22
CLN6-202ENST00000538696 C3orf38Q5JPI3 329 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 HIST2H2AA3Q6FI13 130 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 MIER2Q8N344 545 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 OR7G3Q8NG95 312 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 UBE2E3Q969T4 207 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 PMEPA1Q969W9 287 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 MTERF1Q99551 399 aaKnown RBP16.41■□□□□ 0.22
CLN6-202ENST00000538696 RHBGQ9H310 441 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 FANCEQ9HB96 536 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 APMAPQ9HDC9 416 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 SDR39U1Q9NRG7 319 aaPredicted RBP16.41■□□□□ 0.22
CLN6-202ENST00000538696 C1orf109Q9NX04 203 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 SATB2Q9UPW6 733 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 PCDHGA11Q9Y5H2 935 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 AP1M2Q9Y6Q5 423 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 C9JVG2 144 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 PRPH2P23942 346 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 CUL3Q13618 768 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 CYLC2Q14093 348 aaPredicted RBP16.4■□□□□ 0.22
CLN6-202ENST00000538696 PDCD4Q53EL6 469 aaKnown RBP16.4■□□□□ 0.22
CLN6-202ENST00000538696 IL23RQ5VWK5 629 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 ASPGQ86U10 573 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 FUNDC1Q8IVP5 155 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 CSNK1A1LQ8N752 337 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 RBM15BQ8NDT2 890 aaKnown RBP16.4■□□□□ 0.22
CLN6-202ENST00000538696 HUS1BQ8NHY5 278 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 WDR36Q8NI36 951 aaKnown RBP16.4■□□□□ 0.22
CLN6-202ENST00000538696 RP9Q8TA86 221 aaKnown RBP16.4■□□□□ 0.22
CLN6-202ENST00000538696 CREB3L4Q8TEY5 395 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 N4BP2L2Q92802 583 aaPredicted RBP16.4■□□□□ 0.22
CLN6-202ENST00000538696 RERGQ96A58 199 aaPredicted RBP16.4■□□□□ 0.22
CLN6-202ENST00000538696 TM4SF19Q96DZ7 209 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 BRINP2Q9C0B6 783 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 SPRTNQ9H040 489 aaPredicted RBP16.4■□□□□ 0.22
CLN6-202ENST00000538696 ENAMQ9NRM1 1142 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 STARD5Q9NSY2 213 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 MRGBPQ9NV56 204 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 PISDQ9UG56 409 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 RARRES3Q9UL19 164 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 TSC22D4Q9Y3Q8 395 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 SPTBN4Q9H254 2564 aa16.4■□□□□ 0.22
CLN6-202ENST00000538696 NPIPB8E9PQR5 432 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 NR5A2O00482 541 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 PLD2O14939 933 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 SRPX2O60687 465 aaPredicted RBP16.39■□□□□ 0.21
CLN6-202ENST00000538696 SEC22BO75396 215 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 ETHE1O95571 254 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 TBX6O95947 436 aaPredicted RBP16.39■□□□□ 0.21
CLN6-202ENST00000538696 FGF5P12034 268 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 HSD3B1P14060 373 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 NQO1P15559 274 aaKnown RBP16.39■□□□□ 0.21
CLN6-202ENST00000538696 HSD3B2P26439 372 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 GSTM2P28161 218 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 RASSF2P50749 326 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 ITGA1P56199 1179 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 RPS13P62277 151 aaKnown RBP16.39■□□□□ 0.21
CLN6-202ENST00000538696 IRX1P78414 480 aaPredicted RBP16.39■□□□□ 0.21
CLN6-202ENST00000538696 MXRA7P84157 204 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 ZNF33BQ06732 778 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 RPS6KA2Q15349 733 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 SMU1Q2TAY7 513 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 HKDC1Q2TB90 917 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 PRTGQ2VWP7 1150 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 WASHC2DQ5SRD0 308 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 DGLUCYQ7Z3D6 616 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 TTLQ8NG68 377 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 NT5CQ8TCD5 201 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 RCN3Q96D15 328 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 REPS1Q96D71 796 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 CMTM7Q96FZ5 175 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 APIPQ96GX9 242 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 CTRCQ99895 268 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 MACROD1Q9BQ69 325 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 BTBD10Q9BSF8 475 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 DMRT3Q9NQL9 472 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 FBXO8Q9NRD0 319 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.39■□□□□ 0.21
CLN6-202ENST00000538696 SLC39A1Q9NY26 324 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 ASIC5Q9NY37 505 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 TAS2R1Q9NYW7 299 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 NOP53Q9NZM5 478 aaKnown RBP16.39■□□□□ 0.21
CLN6-202ENST00000538696 CCDC167Q9P0B6 97 aa16.39■□□□□ 0.21
CLN6-202ENST00000538696 CFAP73A6NFT4 308 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 ANKDD1BA6NHY2 528 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 MAGEB17A8MXT2 336 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 NDUFS4O43181 175 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 SH3BGRLO75368 114 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 OR2B3O76000 313 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 TIAF1O95411 115 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 EIF2S1P05198 315 aaKnown RBP16.38■□□□□ 0.21
CLN6-202ENST00000538696 JMJD7P0C870 316 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 G6PDP11413 515 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 SERPINB1P30740 379 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 GCGRP47871 477 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 MAPK10P53779 464 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 UFM1P61960 85 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms