RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 ATP4BP51164 291 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 MNAT1P51948 309 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 CLNS1AP54105 237 aaKnown RBP10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 C2orf80Q0P641 193 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 KLF10Q13118 480 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 STX5Q13190 355 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 SLAMF1Q13291 335 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 ILKQ13418 452 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 CYLC2Q14093 348 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 KCNAB1Q14722 419 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 SLC9A5Q14940 896 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 TRIP6Q15654 476 aaKnown RBP10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 GPR19Q15760 415 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 ZIC1Q15915 447 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 FRMPD2BQ6IN97 320 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 DBX2Q6ZNG2 339 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 RNF44Q7L0R7 432 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 COMMD6Q7Z4G1 85 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 CLNKQ7Z7G1 428 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 METTL4Q8N3J2 472 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 DNAJC22Q8N4W6 341 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 OR2L5Q8NG80 312 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 CLHC1Q8NHS4 586 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 NT5CQ8TCD5 201 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 CREB3L4Q8TEY5 395 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 STARD8Q92502 1023 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 GFM2Q969S9 779 aaKnown RBP10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 GAL3ST3Q96A11 431 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 OR2A5Q96R48 311 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 NDC1Q9BTX1 674 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 SARGQ9BW04 601 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 FAM60AQ9NP50 221 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 MIEF1Q9NQG6 463 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 TXLNGQ9NUQ3 528 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 AIG1Q9NVV5 245 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 BAIAP2L1Q9UHR4 511 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 MCM8Q9UJA3 840 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 RARRES3Q9UL19 164 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 PPT2Q9UMR5 302 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 COPG1Q9Y678 874 aaKnown RBP10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 U3KQA8 63 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 USP34Q70CQ2 3546 aa10.16□□□□□ -0.78
TNFRSF1A-211ENST00000538363 CABIN1Q9Y6J0 2220 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 HEATR5BQ9P2D3 2071 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 IGHV5-10-1A0A0J9YXX1 117 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 CCDC154A6NI56 674 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 RTCAO00442 366 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 ANGPT2O15123 496 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 SLC22A2O15244 555 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 ATP5HO75947 161 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 ETHE1O95571 254 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 SNRPB2P08579 225 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 CDK4P11802 303 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 COX7A2P14406 83 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 NELFEP18615 380 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 S100A3P33764 101 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 POLR2JP52435 117 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 DIO3P55073 304 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 MTTPP55157 894 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 ITGA1P56199 1179 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 PRSS12P56730 875 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 ZNF763Q0D2J5 394 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 SQSTM1Q13501 440 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 ART3Q13508 389 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 TUBB3Q13509 450 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 TRA2AQ13595 282 aaKnown RBP eCLIP10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 HERC3Q15034 1050 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 MUM1Q2TAK8 710 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 HKDC1Q2TB90 917 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 DEFB134Q4QY38 66 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 PDCD4Q53EL6 469 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 NIPAL1Q6NVV3 410 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 TLDC1Q6P9B6 456 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 FOXR1Q6PIV2 292 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 PAOXQ6QHF9 649 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 R3HCC1LQ7Z5L2 792 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 KIAA2013Q8IYS2 634 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 CPSF7Q8N684 471 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 FITM2Q8N6M3 262 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 KCT2Q8NC54 265 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 AGBL5Q8NDL9 886 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 RCBTB1Q8NDN9 531 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 DEFB124Q8NES8 71 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 VPS37AQ8NEZ2 397 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 MS4A6EQ96DS6 147 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 KLHL31Q9H511 634 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 ZNF768Q9H5H4 540 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 FGF21Q9NSA1 209 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 ZIM2Q9NZV7 527 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 SH3BP4Q9P0V3 963 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 TAGLN3Q9UI15 199 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 ADAM29Q9UKF5 820 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 PILRAQ9UKJ1 303 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 FBXW2Q9UKT8 454 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 PCDHGB4Q9UN71 923 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 CDC14AQ9UNH5 594 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 KLK4Q9Y5K2 254 aa10.15□□□□□ -0.78
TNFRSF1A-211ENST00000538363 GOLGA4Q13439 2230 aaKnown RBP10.14□□□□□ -0.79
TNFRSF1A-211ENST00000538363 FAM234BA2RU67 622 aa10.14□□□□□ -0.79
TNFRSF1A-211ENST00000538363 EFCAB7A8K855 629 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms