RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SERINC5Q86VE9 423 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 MFSD2AQ8NA29 543 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 SPERTQ8NA61 448 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 C2CD4AQ8NCU7 369 aaPredicted RBP16.25■□□□□ 0.19
SCARB1-205ENST00000538291 STON2Q8WXE9 905 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 NECTIN4Q96NY8 510 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 FAM129BQ96TA1 746 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 METTL8Q9H825 291 aaKnown RBP16.25■□□□□ 0.19
SCARB1-205ENST00000538291 PLEKHA6Q9Y2H5 1048 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 MATN2O00339 956 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 SLC22A1O15245 554 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 GJB5O95377 273 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 HLA-DPB1P04440 258 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 ITGB1P05556 798 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 PVALBP20472 110 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-205ENST00000538291 MAPK3P27361 379 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-205ENST00000538291 TRAM2Q15035 370 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 TMEM225Q6GV28 225 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF227Q86WZ6 799 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 LRCH3Q96II8 777 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 G6PC3Q9BUM1 346 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 SLC2A11Q9BYW1 496 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 GNG8Q9UK08 70 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 CREG1O75629 220 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 ABCC6O95255 1503 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 ASGR2P07307 311 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 ENDOUP21128 410 aaKnown RBP16.24■□□□□ 0.19
SCARB1-205ENST00000538291 RAB39AQ14964 217 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 FBXO43Q4G163 708 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 LRIF1Q5T3J3 769 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 C14orf80Q86SX3 495 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 RNF130Q86XS8 419 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 SMARCD2Q92925 531 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 XKR8Q9H6D3 395 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 EBF2Q9HAK2 575 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 TRPV4Q9HBA0 871 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 TEX264Q9Y6I9 313 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 PLOD2O00469 737 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 PSKH1P11801 424 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 CKMT2P17540 419 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 EIF4HQ15056 248 aaKnown RBP16.24■□□□□ 0.19
SCARB1-205ENST00000538291 SPATC1Q76KD6 591 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 TTYH2Q9BSA4 534 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 REEP4Q9H6H4 257 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 RMI1Q9H9A7 625 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 C12orf4Q9NQ89 552 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 GLOD5A6NK44 160 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 HEPACAM2A8MVW5 462 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 ADAMTS3O15072 1205 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 SLC2A2P11168 524 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-205ENST00000538291 PEPDP12955 493 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 FUT4P22083 530 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 CLRN1P58418 232 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 MVKQ03426 396 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 SCGB2B2Q4G0G5 96 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 FLYWCH1Q4VC44 716 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 C12orf76Q8N812 135 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-205ENST00000538291 IFT52Q9Y366 437 aa16.24■□□□□ 0.19
SCARB1-205ENST00000538291 OR2AT4A6NND4 320 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 OXTRP30559 389 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 GRK5P34947 590 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 HNF1BP35680 557 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 CITED4Q96RK1 184 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 MCHR1Q99705 422 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 YTHDF1Q9BYJ9 559 aaKnown RBP16.23■□□□□ 0.19
SCARB1-205ENST00000538291 MVB12BQ9H7P6 319 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 LAMP5Q9UJQ1 280 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 ZFR2Q9UPR6 939 aaKnown RBP16.23■□□□□ 0.19
SCARB1-205ENST00000538291 PADI2Q9Y2J8 665 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 TLX2O43763 284 aaPredicted RBP16.23■□□□□ 0.19
SCARB1-205ENST00000538291 DPY19L3Q6ZPD9 716 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 TOMM5Q8N4H5 51 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 INO80EQ8NBZ0 244 aaPredicted RBP16.23■□□□□ 0.19
SCARB1-205ENST00000538291 NINJ1Q92982 152 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 SCAMP4Q969E2 229 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 BORCS8Q96FH0 119 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 WDR77Q9BQA1 342 aaPredicted RBP16.23■□□□□ 0.19
SCARB1-205ENST00000538291 HHATLQ9HCP6 504 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 A0A1B0GVT2 93 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 A0A1W2PQU0 124 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF860A6NHJ4 632 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 TOR1BO14657 336 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 VILLO15195 856 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 FBLP22087 321 aaKnown RBP16.23■□□□□ 0.19
SCARB1-205ENST00000538291 ELAVL3Q14576 367 aaKnown RBP16.23■□□□□ 0.19
SCARB1-205ENST00000538291 GPAT4Q86UL3 456 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 OSTF1Q92882 214 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 BADQ92934 168 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 TMEM203Q969S6 136 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 RBCK1Q9BYM8 510 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 HCN2Q9UL51 889 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 DNMT3AQ9Y6K1 912 aaPredicted RBP16.23■□□□□ 0.19
SCARB1-205ENST00000538291 SLC16A5O15375 505 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 MEF2AQ02078 507 aaPredicted RBP16.23■□□□□ 0.19
SCARB1-205ENST00000538291 PMS2P3Q13401 168 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 LIPJQ5W064 366 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 PAQR7Q86WK9 346 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 NAXEQ8NCW5 288 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 ACTR3BQ9P1U1 418 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 SLC7A8Q9UHI5 535 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms