RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 CRNNQ9UBG3 495 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-203ENST00000537024 UXTQ9UBK9 157 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-203ENST00000537024 HEY2Q9UBP5 337 aa3.81□□□□□ -1.8
SNHG1-203ENST00000537024 DDX25Q9UHL0 483 aaKnown RBP3.81□□□□□ -1.8
SNHG1-203ENST00000537024 RASAL2Q9UJF2 1139 aa3.81□□□□□ -1.8
SNHG1-203ENST00000537024 GTF3C4Q9UKN8 822 aa3.81□□□□□ -1.8
SNHG1-203ENST00000537024 ACSL5Q9ULC5 683 aa3.81□□□□□ -1.8
SNHG1-203ENST00000537024 HS3ST3B1Q9Y662 390 aa3.81□□□□□ -1.8
SNHG1-203ENST00000537024 PRRC2CQ9Y520 2896 aaKnown RBP3.81□□□□□ -1.8
SNHG1-203ENST00000537024 TNRC6AQ8NDV7 1962 aaKnown RBP3.81□□□□□ -1.8
SNHG1-203ENST00000537024 ABCA4P78363 2273 aa3.81□□□□□ -1.8
SNHG1-203ENST00000537024 TDRD6O60522 2096 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 C10orf142B7Z368 130 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 TLR4O00206 839 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 CASC3O15234 703 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 MSH4O15457 936 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 HSPA12AO43301 675 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 KCNAB3O43448 404 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 DUX1O43812 170 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 CACNG3O60359 315 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 ZIC3O60481 467 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 RBMXL2O75526 392 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 OLFM2O95897 454 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 TRUB2O95900 331 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 EDN1P05305 212 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 CALM1P0DP23 149 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 CALM2P0DP24 149 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 CALM3P0DP25 149 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 LIFP15018 202 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 NAGAP17050 411 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 IFNAR1P17181 557 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 MUTP22033 750 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 PTAFRP25105 342 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 CD82P27701 267 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 MARCKSP29966 332 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 STX2P32856 288 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 RPL9P32969 192 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 MC5RP33032 325 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 TNNT3P45378 269 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 MMP13P45452 471 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 COMPP49747 757 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 RAB28P51157 221 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 PSMC5P62195 406 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 CDC20Q12834 499 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 RALGDSQ12967 914 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 CTTNQ14247 550 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 PTGR1Q14914 329 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 DCAF4L1Q3SXM0 396 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 CBWD6Q4V339 395 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 SLC39A12Q504Y0 691 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 FAM98BQ52LJ0 330 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 PPP6R3Q5H9R7 873 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 CBWD3Q5JTY5 395 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 ARMC4Q5T2S8 1044 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 C6orf163Q5TEZ5 329 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 OTUD1Q5VV17 481 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 TMEM211Q6ICI0 200 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 DUS1LQ6P1R4 473 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 GUSBP11Q6P575 273 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 KCTD18Q6PI47 426 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 PET117Q6UWS5 81 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 ALKAL1Q6UXT8 129 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 RBPMS2Q6ZRY4 209 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 Q6ZSV7 163 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 MIER3Q7Z3K6 550 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 ZC3HC1Q86WB0 502 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 PHC2Q8IXK0 858 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 NAGSQ8N159 534 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 TTC30BQ8N4P2 665 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 AADATQ8N5Z0 425 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 ARFGAP1Q8N6T3 406 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 XXYLT1Q8NBI6 393 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 RBM15BQ8NDT2 890 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 GOT1L1Q8NHS2 421 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 CFAP61Q8NHU2 1237 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 SETD6Q8TBK2 473 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 SPPL2BQ8TCT7 592 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 C2orf15Q8WU43 125 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 SCFD1Q8WVM8 642 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 C18orf25Q96B23 403 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 CENPTQ96BT3 561 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 ORAI1Q96D31 301 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 COQ8BQ96D53 544 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 ARSGQ96EG1 525 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 FER1L6-AS2Q96M78 137 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 LRFN5Q96NI6 719 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 SPAG5Q96R06 1193 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 TEKT3Q9BXF9 490 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 TRIM9Q9C026 710 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 KRT23Q9C075 422 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 LHX5Q9H2C1 402 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 KCNN2Q9H2S1 579 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 RAD21L1Q9H4I0 556 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 RPF1Q9H9Y2 349 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 SEBOXQ9HB31 216 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 MMP25Q9NPA2 562 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 PRMT7Q9NVM4 692 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 DNAJC17Q9NVM6 304 aaKnown RBP3.8□□□□□ -1.8
SNHG1-203ENST00000537024 IL36RNQ9UBH0 155 aa3.8□□□□□ -1.8
SNHG1-203ENST00000537024 PISDQ9UG56 409 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms