RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 HERV-K104P61576 105 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 SLC25A11Q02978 314 aaKnown RBP17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 TSTQ16762 297 aaKnown RBP17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 LRIF1Q5T3J3 769 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 TMEM234Q8WY98 164 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 RBCK1Q9BYM8 510 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 ABCD2Q9UBJ2 740 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 DPPA5A6NC42 116 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 GLOD5A6NK44 160 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 CREG1O75629 220 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 DCKP27707 260 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 GGT5P36269 586 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 GSK3BP49841 420 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF763Q0D2J5 394 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 ABHD18Q0P651 414 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 DNASE1L3Q13609 305 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 FBXO43Q4G163 708 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 TMEM225Q6GV28 225 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 Q6ZVL8 140 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 HSPBAP1Q96EW2 488 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 LRCH3Q96II8 777 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 TSGA13Q96PP4 275 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 TELO2Q9Y4R8 837 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 IRS2Q9Y4H2 1338 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 DNM1LO00429 736 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 CKMT2P17540 419 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 FPR1P21462 350 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 CBLP22681 906 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 NUDT6P53370 316 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 GNG2P59768 71 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 LRRC69Q6ZNQ3 347 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 OR8H3Q8N146 312 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 MS4A12Q9NXJ0 267 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 PLCL2Q9UPR0 1127 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 VAMP1P23763 118 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 OR2B6P58173 313 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 SLC36A4Q6YBV0 504 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 PIGWQ7Z7B1 504 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 OR5T2Q8NGG2 359 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 WDR92Q96MX6 357 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 GPR34Q9UPC5 381 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 H7BY64 318 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 RHOP08100 348 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 PMS2P3Q13401 168 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 FLYWCH1Q4VC44 716 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 SSX6Q7RTT6 188 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF550Q7Z398 422 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 IL22RA1Q8N6P7 574 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF283Q8N7M2 679 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 RAB7BQ96AH8 199 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 PRAP1Q96NZ9 151 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 TMEM121BQ9BXQ6 578 aaPredicted RBP17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 POLDIP3Q9BY77 421 aaKnown RBP17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 OR51I1Q9H343 314 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 SPHK2Q9NRA0 654 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 NPIPA2E9PIF3 369 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 NPIPA3F8WFD2 350 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 PDLIM1O00151 329 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 MATN2O00339 956 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 SOCS5O75159 536 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 MEF2AQ02078 507 aaPredicted RBP17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 EMX2Q04743 252 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 TGFBIQ15582 683 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 GNPDA2Q8TDQ7 276 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 OSTF1Q92882 214 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 TMEM41AQ96HV5 264 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 PTCHD1Q96NR3 888 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF471Q9BX82 626 aaPredicted RBP17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 LOC100130705A0A1B0GUX0 176 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 COCHO43405 550 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF12P17014 697 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 ARL3P36405 182 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 TRAM2Q15035 370 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 SPANXN4Q5MJ08 99 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 ANKRD26P1Q6NSI1 321 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 THAP6Q8TBB0 222 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 SFXN1Q9H9B4 322 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 PDE7BQ9NP56 450 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 ALG5Q9Y673 324 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 DNMT3AQ9Y6K1 912 aaPredicted RBP17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 A0A0D9SEW6 157 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 SOX14O95416 240 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 MAGEA12P43365 314 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 TAS2R43P59537 309 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 ADAM17P78536 824 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 NPY6RQ99463 290 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 XKR8Q9H6D3 395 aa17.55■□□□□ 0.4
SFSWAP-203ENST00000535236 PAK4O96013 591 aaPredicted RBP17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 MVKQ03426 396 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 RUNDC3AQ59EK9 446 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 BEND4Q6ZU67 534 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 FANK1Q8TC84 345 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 MCHR1Q99705 422 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 G6PC3Q9BUM1 346 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 SLC5A7Q9GZV3 580 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF700Q9H0M5 742 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 VNN3Q9NY84 501 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 ZFR2Q9UPR6 939 aaKnown RBP17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 XRCC1P18887 633 aaPredicted RBP17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 FBLP22087 321 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms