RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 ROPN1Q9HAT0 212 aaPredicted RBP10.66□□□□□ -0.7
CLCF1-202ENST00000533438 OLAHQ9NV23 265 aa10.66□□□□□ -0.7
CLCF1-202ENST00000533438 ZFATQ9P243 1243 aa10.66□□□□□ -0.7
CLCF1-202ENST00000533438 C19orf25Q9UFG5 118 aaPredicted RBP10.66□□□□□ -0.7
CLCF1-202ENST00000533438 NAALAD2Q9Y3Q0 740 aa10.66□□□□□ -0.7
CLCF1-202ENST00000533438 OR5H15A6NDH6 313 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 PABPN1LA6NDY0 278 aaKnown RBP10.65□□□□□ -0.7
CLCF1-202ENST00000533438 NDUFS4O43181 175 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 OR1F1O43749 312 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 GALR3O60755 368 aaPredicted RBP10.65□□□□□ -0.7
CLCF1-202ENST00000533438 F10P00742 488 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 STSP08842 583 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 IL10P22301 178 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 GCAP28676 217 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 SCTRP47872 440 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 RHAGQ02094 409 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 IFFO1Q0D2I5 559 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 ILF2Q12905 390 aaKnown RBP10.65□□□□□ -0.7
CLCF1-202ENST00000533438 HERC3Q15034 1050 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 BTBD16Q32M84 506 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 ABHD17BQ5VST6 288 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 ZNF787Q6DD87 383 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 CROCCP2Q86T23 111 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 CTAGE3PQ8IX95 158 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 PPM1NQ8N819 430 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 OR5T3Q8NGG3 340 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 NT5CQ8TCD5 201 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 NR4A3Q92570 626 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 PEX11GQ96HA9 241 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 PKNOX2Q96KN3 472 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 CPNE1Q99829 537 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 MCMBPQ9BTE3 642 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 LANCL2Q9NS86 450 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 ZFP69BQ9UJL9 534 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 ZNF180Q9UJW8 692 aa10.65□□□□□ -0.7
CLCF1-202ENST00000533438 PDZD2O15018 2839 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 FAM95CA0A1B0GW59 222 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 ZNF860A6NHJ4 632 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 MAGEB17A8MXT2 336 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 POC1B-GALNT4F8VUJ3 575 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 CDC7O00311 574 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 LRRTM2O43300 516 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 DNAJB6O75190 326 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 CDH16O75309 829 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 PIAS1O75925 651 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 ALOX12P18054 663 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 COL8A1P27658 744 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 AHRP35869 848 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 GP5P40197 560 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 MSH2P43246 934 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 CDKL1Q00532 357 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 REEP5Q00765 189 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 ZNF33BQ06732 778 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 HYAL2Q12891 473 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 CSHL1Q14406 222 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 ZNF460Q14592 562 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 GRTP1Q5TC63 336 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 ADGRD1Q6QNK2 874 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 THOC6Q86W42 341 aaKnown RBP10.64□□□□□ -0.71
CLCF1-202ENST00000533438 RIBC1Q8N443 379 aaPredicted RBP10.64□□□□□ -0.71
CLCF1-202ENST00000533438 NKAPQ8N5F7 415 aaKnown RBP10.64□□□□□ -0.71
CLCF1-202ENST00000533438 ANKRD53Q8N9V6 530 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 M1APQ8TC57 530 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 EPS8L3Q8TE67 593 aaKnown RBP10.64□□□□□ -0.71
CLCF1-202ENST00000533438 UTP15Q8TED0 518 aaKnown RBP10.64□□□□□ -0.71
CLCF1-202ENST00000533438 DCAKDQ8WVC6 231 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 ANKRD49Q8WVL7 239 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 SLC5A11Q8WWX8 675 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 TSLPQ969D9 159 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 MAGEB10Q96LZ2 347 aaPredicted RBP10.64□□□□□ -0.71
CLCF1-202ENST00000533438 TSNARE1Q96NA8 513 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 NPAS2Q99743 824 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 RBCK1Q9BYM8 510 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 SLC6A16Q9GZN6 736 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.64□□□□□ -0.711e-6■■■■□ 21.5
CLCF1-202ENST00000533438 PELI2Q9HAT8 420 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 MMP25Q9NPA2 562 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 STMN3Q9NZ72 180 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 PSMC3IPQ9P2W1 217 aaPredicted RBP10.64□□□□□ -0.71
CLCF1-202ENST00000533438 TEKT2Q9UIF3 430 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 OSGIN2Q9Y236 505 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 OARD1Q9Y530 152 aa10.64□□□□□ -0.71
CLCF1-202ENST00000533438 DIDO1Q9BTC0 2240 aaKnown RBP10.64□□□□□ -0.71
CLCF1-202ENST00000533438 NPEPPSL1A6NEC2 478 aa10.63□□□□□ -0.71
CLCF1-202ENST00000533438 CHST10O43529 356 aa10.63□□□□□ -0.71
CLCF1-202ENST00000533438 PRAMEF2O60811 474 aa10.63□□□□□ -0.71
CLCF1-202ENST00000533438 CDC123O75794 336 aaPredicted RBP10.63□□□□□ -0.71
CLCF1-202ENST00000533438 RASAL1O95294 804 aa10.63□□□□□ -0.71
CLCF1-202ENST00000533438 WISP3O95389 354 aaPredicted RBP10.63□□□□□ -0.71
CLCF1-202ENST00000533438 B3GALT4O96024 378 aa10.63□□□□□ -0.71
CLCF1-202ENST00000533438 FHP07954 510 aa10.63□□□□□ -0.71
CLCF1-202ENST00000533438 INHBAP08476 426 aa10.63□□□□□ -0.71
CLCF1-202ENST00000533438 ZNF888P0CJ79 500 aaPredicted RBP10.63□□□□□ -0.71
CLCF1-202ENST00000533438 SMIM10L1P0DMW3 83 aa10.63□□□□□ -0.71
CLCF1-202ENST00000533438 POU3F2P20265 443 aaPredicted RBP10.63□□□□□ -0.71
CLCF1-202ENST00000533438 CNTFP26441 200 aa10.63□□□□□ -0.71
CLCF1-202ENST00000533438 SERPINB9P50453 376 aa10.63□□□□□ -0.71
CLCF1-202ENST00000533438 TAS2R39P59534 338 aa10.63□□□□□ -0.71
CLCF1-202ENST00000533438 RGS1Q08116 209 aa10.63□□□□□ -0.71
CLCF1-202ENST00000533438 USP10Q14694 798 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms