RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 EXT2Q93063 718 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 FKBP10Q96AY3 582 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 ZNF317Q96PQ6 595 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 GATA5Q9BWX5 397 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 WWP1Q9H0M0 922 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 GSX1Q9H4S2 264 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 WDR54Q9H977 334 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 COG4Q9H9E3 785 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 PSD3Q9NYI0 1048 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 DHCR7Q9UBM7 475 aaKnown RBP10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 HEBP2Q9Y5Z4 205 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 NUP210LQ5VU65 1888 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 SYCE1LA8MT33 242 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 SUPT3HB4E1H0 165 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 SLC16A5O15375 505 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 ZSCAN9O15535 394 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 SUPT3HO75486 399 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 ALBP02768 609 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 SLC35G4P0C7Q5 338 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 PIM1P11309 404 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 MTHFD2P13995 350 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 PDHA2P29803 388 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 IST1P53990 364 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 PRKAA2P54646 552 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 DNAJB13P59910 316 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 PLOD1Q02809 727 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 BST1Q10588 318 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 ASPHQ12797 758 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 CES4AQ5XG92 561 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 ATG16L1Q676U5 607 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 ZCCHC23Q6ZST2 131 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 OR6Y1Q8NGX8 325 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 HM13Q8TCT9 377 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 SKA2Q8WVK7 121 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 SREK1Q8WXA9 508 aaKnown RBP10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 ASB11Q8WXH4 323 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 DLG3Q92796 817 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 NINJ1Q92982 152 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 CCDC126Q96EE4 140 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 PHF21BQ96EK2 531 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 CHMP6Q96FZ7 201 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 MAGED4Q96JG8 741 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 SPRTNQ9H040 489 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 RABEP2Q9H5N1 569 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 METRNQ9UJH8 293 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 TINAGQ9UJW2 476 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 ADAMTS6Q9UKP5 1117 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 MEMO1Q9Y316 297 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 HS3ST3B1Q9Y662 390 aa10.74□□□□□ -0.69
TRAPPC4-213ENST00000533149 DOCK10Q96BY6 2186 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 CNTRLQ7Z7A1 2325 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 NCOA6Q14686 2063 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 CCDC88CQ9P219 2028 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 A8MT66 165 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 C2orf74A8MZ97 194 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 H3BMH7 237 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 GFYI3L273 518 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 KLF11O14901 512 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 MATN4O95460 622 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 SERPINE1P05121 402 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 C8GP07360 202 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 GFAPP14136 432 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 PVRP15151 417 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 ITGAXP20702 1163 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 IMPDH1P20839 514 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 DRD4P21917 467 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 GRK2P25098 689 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 NAGLUP54802 743 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 LTBQ06643 244 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 RPA4Q13156 261 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 RBBP7Q16576 425 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 PHKG1Q16816 387 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 PFKFB4Q16877 469 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 SLC5A12Q1EHB4 618 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 LIPMQ5VYY2 423 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 SBSNQ6UWP8 590 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 UBE2R2Q712K3 238 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 ADAMTSL2Q86TH1 951 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 TMEM200AQ86VY9 491 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 SLC22A9Q8IVM8 553 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 SLC22A15Q8IZD6 547 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 ZNF655Q8N720 491 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 CCNYL1Q8N7R7 359 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 PTGR2Q8N8N7 351 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 CFAP61Q8NHU2 1237 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 SUN3Q8TAQ9 357 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 RAB3IL1Q8TBN0 382 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 CA5BP1Q8WTZ4 195 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 CHRNA10Q9GZZ6 450 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 KLHL25Q9H0H3 589 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 ZNF395Q9H8N7 513 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 SLCO1B3Q9NPD5 702 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 IRAK4Q9NWZ3 460 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 UTP6Q9NYH9 597 aaKnown RBP10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 CD274Q9NZQ7 290 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 NXT1Q9UKK6 140 aaKnown RBP10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 TMCO1Q9UM00 188 aa10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 MRPS2Q9Y399 296 aaKnown RBP10.73□□□□□ -0.69
TRAPPC4-213ENST00000533149 OARD1Q9Y530 152 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms