RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ARHGAP40Q5TG30 622 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 KHDRBS2Q5VWX1 349 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 ZNF385CQ66K41 422 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 ATG16L1Q676U5 607 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 TRIM40Q6P9F5 258 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 OVCH1Q7RTY7 1134 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 CLYBLQ8N0X4 340 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 RNF175Q8N4F7 328 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 AFAP1L2Q8N4X5 818 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 METTL27Q8N6F8 245 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 KDF1Q8NAX2 398 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 OR2L5Q8NG80 312 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 OR9A4Q8NGU2 314 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 DYDC1Q8WWB3 177 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 ZCCHC14Q8WYQ9 949 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 GAL3ST3Q96A11 431 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 KIAA1143Q96AT1 154 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 RGMAQ96B86 450 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 SMIM10Q96HG1 83 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 KCNA7Q96RP8 456 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 SERPINI1Q99574 410 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 EFHD1Q9BUP0 239 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 YIPF2Q9BWQ6 316 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 GPR87Q9BY21 358 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 FAM117AQ9C073 453 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 OR51B5Q9H339 312 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 MANSC1Q9H8J5 431 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 CLK4Q9HAZ1 481 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 INTS9Q9NV88 658 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 AHSPQ9NZD4 102 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 KCND3Q9UK17 655 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 PPT2Q9UMR5 302 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 NAALAD2Q9Y3Q0 740 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 TRAF6Q9Y4K3 522 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 LOC101059948A0A1B0GTJ6 334 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 C21orf140B9A014 251 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 SGK494L7N484 410 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 AZIN1O14977 448 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 ITM2AO43736 263 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 GALR3O60755 368 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 SH3BGRLO75368 114 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 KLHL18O94889 574 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 CHEK2O96017 543 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 ALBP02768 609 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 RAB40ALP0C0E4 278 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 HSD3B1P14060 373 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 CHN1P15882 459 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 NR1D1P20393 614 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 FBLP22087 321 aaKnown RBP10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 HSD3B2P26439 372 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 SERPINB3P29508 390 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 DLSTP36957 453 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 RAP1GDS1P52306 607 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 ARFIP1P53367 373 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 FOXA1P55317 472 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 BTN3A2P78410 334 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 OCA2Q04671 838 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 DSG2Q14126 1118 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 AP5B1Q2VPB7 878 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 TCHHL1Q5QJ38 904 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 LCN10Q6JVE6 187 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 ABHD17CQ6PCB6 329 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 LRRC69Q6ZNQ3 347 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 PROSER1Q86XN7 944 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 DTWD1Q8N5C7 304 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 GBP7Q8N8V2 638 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 RAB3IL1Q8TBN0 382 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 CT55Q8WUE5 264 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 DCBLD2Q96PD2 775 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 KCNC2Q96PR1 638 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 TBCDQ9BTW9 1192 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 ROGDIQ9GZN7 287 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 ILKAPQ9H0C8 392 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 GPN2Q9H9Y4 310 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 BRF2Q9HAW0 419 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 PRDM7Q9NQW5 492 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 FARSBQ9NSD9 589 aaKnown RBP10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 TRPC4Q9UBN4 977 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 CROTQ9UKG9 612 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 FARSAQ9Y285 508 aaKnown RBP10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 RAXQ9Y2V3 346 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 KIF26BQ2KJY2 2108 aa10.66□□□□□ -0.7
TRAPPC4-211ENST00000533012 A0A0G2JN53 185 aa10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 SERTM1A2A2V5 107 aa10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 SAP18O00422 153 aaKnown RBP10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 B3GALT2O43825 422 aa10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 ITGAXP20702 1163 aa10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 TSFMP43897 325 aaKnown RBP10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 MTTPP55157 894 aa10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 BST1Q10588 318 aa10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 DNASE1L3Q13609 305 aa10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 SLC9A5Q14940 896 aa10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 ABRAXAS2Q15018 415 aa10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 NCF4Q15080 339 aa10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 SH2D4BQ5SQS7 431 aa10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 KANK2Q63ZY3 851 aa10.65□□□□□ -0.7
TRAPPC4-211ENST00000533012 CLEC6AQ6EIG7 209 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms