RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 G3V2L1 256 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 PAGE1O75459 146 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 NDUFS3O75489 264 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 SNAPC5O75971 98 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 ALPLP05186 524 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 RHOCP08134 193 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 NUDT7P0C024 238 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 NAGAP17050 411 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 TAS2R39P59534 338 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 ST8SIA6P61647 398 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 RRAS2P62070 204 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 FAM209BQ5JX69 171 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 ZBTB37Q5TC79 503 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 KANK2Q63ZY3 851 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 TIGD3Q6B0B8 471 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 MRNIPQ6NTE8 343 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 IL27RAQ6UWB1 636 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF600Q6ZNG1 722 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 SSX9Q7RTT3 188 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 LAPTM4BQ86VI4 370 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 CMTM8Q8IZV2 173 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 MRPL43Q8N983 215 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 TP53I13Q8NBR0 393 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 P2RY11Q96G91 374 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 SLC22A12Q96S37 553 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 MGLLQ99685 303 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 FICDQ9BVA6 458 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 NLNQ9BYT8 704 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 PRKD2Q9BZL6 878 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 OR51E2Q9H255 320 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 SCUBE2Q9NQ36 999 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 ABCC13Q9NSE7 274 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 CMTM6Q9NX76 183 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 TAS2R7Q9NYW3 318 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 MAGED1Q9Y5V3 778 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 ALG5Q9Y673 324 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 TTC3P53804 2025 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 C2orf81A6NN90 581 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 PDCD5O14737 125 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 LYRM1O43325 122 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 PROM1O43490 865 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 HCN1O60741 890 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 VPS26AO75436 327 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 MAPK1P28482 360 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 PRKAR1BP31321 381 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 RYKP34925 604 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 HAAOP46952 286 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 CXCR4P61073 352 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 NRG1Q02297 640 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 CREB5Q02930 508 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 COL9A2Q14055 689 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF460Q14592 562 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 SLC9A5Q14940 896 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 UBXN2BQ14CS0 331 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 HKDC1Q2TB90 917 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 C10orf62Q5T681 223 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 NXNL2Q5VZ03 156 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 FGD2Q7Z6J4 655 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 TAF8Q7Z7C8 310 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 TSPEARQ8WU66 669 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 LURAP1Q96LR2 239 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 KCTD7Q96MP8 289 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 SECISBP2Q96T21 854 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 SSX3Q99909 188 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 SEC22CQ9BRL7 303 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 TRAF4Q9BUZ4 470 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 ELAC1Q9H777 363 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 ATP13A1Q9HD20 1204 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 NT5MQ9NPB1 228 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 TMEM30AQ9NV96 361 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 H2AFY2Q9P0M6 372 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 CDV3Q9UKY7 258 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 TRPM7Q96QT4 1865 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 COL6A3P12111 3177 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 FAM234BA2RU67 622 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 FAM220BPB1ANY3 271 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 IFRD1O00458 451 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 FABP7O15540 132 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 RP2O75695 350 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 FABP3P05413 133 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 CHRM5P08912 532 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 CTSAP10619 480 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 PRG2P13727 222 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 TYMPP19971 482 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 ACADLP28330 430 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 DNAJA1P31689 397 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 PGFP49763 221 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 DAOAP59103 153 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 HNRNPA0Q13151 305 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 ZBTB6Q15916 424 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 PAN3Q58A45 887 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 FAM26DQ5JW98 314 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 PM20D1Q6GTS8 502 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 OR2T5Q6IEZ7 315 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 PGBD2Q6P3X8 592 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 TXNDC11Q6PKC3 985 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 FAM198BQ6UWH4 519 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 RAB11FIP2Q7L804 512 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 SLITRK4Q8IW52 837 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms