RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 CRB3Q9BUF7 120 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 NTMT1Q9BV86 223 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 MS4A8Q9BY19 250 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 ROPN1BQ9BZX4 212 aaPredicted RBP13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 C12orf65Q9H3J6 166 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 NOL11Q9H8H0 719 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 ROPN1Q9HAT0 212 aaPredicted RBP13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 CLK4Q9HAZ1 481 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 PRDM7Q9NQW5 492 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 DCDC2Q9UHG0 476 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 C3orf18Q9UK00 162 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 LOC102723996A0A087X1L8 192 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 ANKDD1BA6NHY2 528 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 H0YIV9 168 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 AGPSO00116 658 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 CHST10O43529 356 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 IGHEP01854 428 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 PROCP04070 461 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 PDGFAP04085 211 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 XCR1P46094 333 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 EMP2P54851 167 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 CDH13P55290 713 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 OLR1P78380 273 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 RUNX2Q13950 521 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 PAGE2BQ5JRK9 111 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 DCAF10Q5QP82 559 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 FAM219BQ5XKK7 198 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 ABHD17CQ6PCB6 329 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 ABHD13Q7L211 337 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 TRABD2AQ86V40 505 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 ZNF843Q8N446 348 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 PLPP5Q8NEB5 264 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 OR2L5Q8NG80 312 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 HUS1BQ8NHY5 278 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 WDR20Q8TBZ3 569 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 GAL3ST3Q96A11 431 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 CDK15Q96Q40 435 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 F2RL3Q96RI0 385 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 ARHGAP9Q9BRR9 750 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 VN1R1Q9GZP7 353 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 ACSS2Q9NR19 701 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 C14orf105Q9NVL8 296 aa13.16□□□□□ -0.3
TSPAN4-220ENST00000532375 A0A0G2JN53 185 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 TLDC2A0PJX2 215 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 URADA6NGE7 173 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 PLIN3O60664 434 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 GLRA3O75311 464 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 TUBBP07437 444 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 KRT15P19012 456 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 KRT4P19013 534 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 IMPDH1P20839 514 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 ATP5F1P24539 256 aaPredicted RBP13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 PIK3CGP48736 1102 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 PRKAA2P54646 552 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 STXBP1P61764 594 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 HERVK_113P63132 956 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 RHAGQ02094 409 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 Q0VFX4 171 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 HIST2H2ACQ16777 129 aaPredicted RBP13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 ZNF678Q5SXM1 525 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 DEPDC1Q5TB30 811 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 HIST2H2AA3Q6FI13 130 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 CA13Q8N1Q1 262 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 RIBC1Q8N443 379 aaPredicted RBP13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 UBE2E3Q969T4 207 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 C8orf44Q96CB5 159 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 PEX11GQ96HA9 241 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 TMEM237Q96Q45 408 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 YIPF2Q9BWQ6 316 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 ERVK-6Q9BXR3 956 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 REXO4Q9GZR2 422 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 SLC25A18Q9H1K4 315 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 ACTR8Q9H981 624 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 PSD3Q9NYI0 1048 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 FBXL4Q9UKA2 621 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 PLAAQ9Y263 795 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 ANGPTL3Q9Y5C1 460 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 CLDN16Q9Y5I7 305 aa13.15□□□□□ -0.3
TSPAN4-220ENST00000532375 FAM227AF5H4B4 570 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 ERI3O43414 337 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 SCELO95171 688 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 CLDN9O95484 217 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 ETHE1O95571 254 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 TGFB1P01137 390 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 COX6A1P12074 109 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 CREB1P16220 341 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 TSPAN8P19075 237 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 IL10P22301 178 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 PIK3CBP42338 1070 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 CCL11P51671 97 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 BTN3A2P78410 334 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 PCOLCEQ15113 449 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 ZRSR2Q15696 482 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 RBBP7Q16576 425 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 CPSF6Q16630 551 aaKnown RBP eCLIP13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 GGTA1PQ4G0N0 100 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 TCTN3Q6NUS6 607 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 NIPAL1Q6NVV3 410 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 ZNF793Q6ZN11 406 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 C4orf33Q8N1A6 199 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms