RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PRPSAP2O60256 369 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 TSPAN1O60635 241 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 SEC22BO75396 215 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 S100A9P06702 114 aaKnown RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 RPSAP08865 295 aaKnown RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 QDPRP09417 244 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 EPB41P11171 864 aaKnown RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 RARGP13631 454 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 FDPSP14324 419 aaKnown RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 PRLRP16471 622 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 ZNF3P17036 446 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 PSMD7P51665 324 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 MNAT1P51948 309 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 ARPC4P59998 168 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 CCNA1P78396 465 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 MRPS15P82914 257 aaKnown RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 SNX1Q13596 522 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 CDH18Q13634 790 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 KRT33BQ14525 404 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 MXD4Q14582 209 aaPredicted RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 FAM189A2Q15884 450 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 MS4A18Q3C1V0 323 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 C2orf76Q3KRA6 126 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 TOR1AIP1Q5JTV8 583 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 AADACL4Q5VUY2 407 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 TPGS2Q68CL5 300 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 NAA16Q6N069 864 aaPredicted RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 LCLAT1Q6UWP7 414 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 CENPQQ7L2Z9 268 aaPredicted RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 NUP54Q7Z3B4 507 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 PRPF39Q86UA1 669 aaKnown RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 MAML2Q8IZL2 1156 aaPredicted RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 C10orf53Q8N6V4 93 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 ZBTB44Q8NCP5 570 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 OR6C4Q8NGE1 309 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 MOSPD2Q8NHP6 518 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 CCDC110Q8TBZ0 833 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 RAPGEF5Q92565 580 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 ARL5BQ96KC2 179 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 KIFC3Q9BVG8 833 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 ACAT2Q9BWD1 397 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 OR10A4Q9H209 315 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 C1orf21Q9H246 121 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 SMARCAD1Q9H4L7 1026 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 EHD1Q9H4M9 534 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 LIN28AQ9H9Z2 209 aaKnown RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 MORF4L1Q9UBU8 362 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 ADD3Q9UEY8 706 aaKnown RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 ZNF215Q9UL58 517 aaPredicted RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 STUB1Q9UNE7 303 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 SMARCA2P51531 1590 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 PEG3Q9GZU2 1588 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 ZNF644Q9H582 1327 aaPredicted RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 KDRP35968 1356 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 IQANK1A0A1B0GTG1 560 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 A0A1W2PR77 199 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 KRT87PA6NCN2 255 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 LRRC72A6NJI9 287 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 HEPACAM2A8MVW5 462 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 YKT6O15498 198 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 RNF113AO15541 343 aaKnown RBP3.18□□□□□ -1.9
PTPRK-220ENST00000531466 TTI1O43156 1089 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 XRCC3O43542 346 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 KERAO60938 352 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 SLU7O95391 586 aaKnown RBP3.18□□□□□ -1.9
PTPRK-220ENST00000531466 PGM3O95394 542 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 PDHBP11177 359 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 IL10P22301 178 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 CTNNA2P26232 953 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 EEF1DP29692 281 aaKnown RBP3.18□□□□□ -1.9
PTPRK-220ENST00000531466 ACSL1P33121 698 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 ACTN2P35609 894 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 GARSP41250 739 aaKnown RBP3.18□□□□□ -1.9
PTPRK-220ENST00000531466 GPC3P51654 580 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 VCPP55072 806 aaKnown RBP3.18□□□□□ -1.9
PTPRK-220ENST00000531466 CDH8P55286 799 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 RBP5P82980 135 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 ARF5P84085 180 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 DR1Q01658 176 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 GBE1Q04446 702 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 YWHAHQ04917 246 aaPredicted RBP3.18□□□□□ -1.9
PTPRK-220ENST00000531466 SPAG1Q07617 926 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 CETN1Q12798 172 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 RALGDSQ12967 914 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 BNIP1Q12981 228 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 STK4Q13043 487 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 NFE2L1Q14494 772 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 CCDC14Q49A88 953 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 RAB41Q5JT25 222 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 ELFN2Q5R3F8 820 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 RNLSQ5VYX0 342 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 KIAA0930Q6ICG6 404 aaPredicted RBP3.18□□□□□ -1.9
PTPRK-220ENST00000531466 RPUSD3Q6P087 351 aaKnown RBP3.18□□□□□ -1.9
PTPRK-220ENST00000531466 C15orf52Q6ZUT6 534 aaKnown RBP3.18□□□□□ -1.9
PTPRK-220ENST00000531466 CHST9Q7L1S5 443 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 DNAJB7Q7Z6W7 309 aaPredicted RBP3.18□□□□□ -1.9
PTPRK-220ENST00000531466 OR4N5Q8IXE1 308 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 SLC7A5P1Q8MH63 180 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 TAGAPQ8N103 731 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 CCDC26Q8TAB7 109 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms