RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 CCDC77Q9BR77 488 aa8.63□□□□□ -1.03
NEDD8-206ENST00000531430 TSGA10Q9BZW7 698 aa8.63□□□□□ -1.03
NEDD8-206ENST00000531430 PCBD2Q9H0N5 130 aa8.63□□□□□ -1.03
NEDD8-206ENST00000531430 CLEC4MQ9H2X3 399 aaPredicted RBP8.63□□□□□ -1.03
NEDD8-206ENST00000531430 TSPY26PQ9H489 355 aa8.63□□□□□ -1.03
NEDD8-206ENST00000531430 LDAHQ9H6V9 325 aa8.63□□□□□ -1.03
NEDD8-206ENST00000531430 ST6GALNAC2Q9UJ37 374 aa8.63□□□□□ -1.03
NEDD8-206ENST00000531430 SH2B3Q9UQQ2 575 aa8.63□□□□□ -1.03
NEDD8-206ENST00000531430 ABCA2Q9BZC7 2435 aa8.63□□□□□ -1.03
NEDD8-206ENST00000531430 PABPN1LA6NDY0 278 aaKnown RBP8.62□□□□□ -1.03
NEDD8-206ENST00000531430 TMEM200CA6NKL6 621 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 A8MVJ9 347 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 ACOT7O00154 380 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 PROM1O43490 865 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 CEP104O60308 925 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 GALR3O60755 368 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-206ENST00000531430 AVILO75366 819 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 CTAG2O75638 210 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 MYO1DO94832 1006 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 HIST1H2AGP0C0S8 130 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-206ENST00000531430 ZNF888P0CJ79 500 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-206ENST00000531430 HIST1H2ADP20671 130 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 ACVR2AP27037 513 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 ARNTP27540 789 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 TRHRP34981 398 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-206ENST00000531430 SSR4P51571 173 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 CCR8P51685 355 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 DLX5P56178 289 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 SKP1P63208 163 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 LTBQ06643 244 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 KIF5AQ12840 1032 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 BMPR2Q13873 1038 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 TRIP13Q15645 432 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-206ENST00000531430 OASLQ15646 514 aaKnown RBP8.62□□□□□ -1.03
NEDD8-206ENST00000531430 EMC4Q5J8M3 183 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 AGTRAPQ6RW13 159 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 B3GNT6Q6ZMB0 384 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 MBOAT1Q6ZNC8 495 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 CENPUQ71F23 418 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 PCGF5Q86SE9 256 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 LIX1LQ8IVB5 337 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 DENND6AQ8IWF6 608 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 TBC1D19Q8N5T2 526 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 ZNF740Q8NDX6 193 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 HIST1H2AHQ96KK5 128 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 SMC6Q96SB8 1091 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 HIST1H2AJQ99878 128 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 SMR3AQ99954 134 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 H2AFJQ9BTM1 129 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 KIFC1Q9BW19 673 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 PRM3Q9NNZ6 103 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 NECTIN3Q9NQS3 549 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 HPF1Q9NWY4 346 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 SAMD15Q9P1V8 674 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 ZFATQ9P243 1243 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 VPS9D1Q9Y2B5 631 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 REXO2Q9Y3B8 237 aaKnown RBP8.62□□□□□ -1.03
NEDD8-206ENST00000531430 SLC22A7Q9Y694 548 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 DNAJC13O75165 2243 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 ZNF407Q9C0G0 2248 aa8.62□□□□□ -1.03
NEDD8-206ENST00000531430 MYOCOSA0A1B0GUC4 107 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 ATP6AP2A0A1C7CYW4 349 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 PINLYPA6NC86 204 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 SAGE2PA6NJ88 616 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 BTNL10A8MVZ5 291 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 GFYI3L273 518 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 WWP2O00308 870 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 CDK2AP1O14519 115 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 ATP6AP2O75787 350 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 ZFAND5O76080 213 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 TUBB4AP04350 444 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 GLI4P10075 376 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 ENO3P13929 434 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-206ENST00000531430 OGNP20774 298 aaKnown RBP8.61□□□□□ -1.03
NEDD8-206ENST00000531430 SAT1P21673 171 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 ADSLP30566 484 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-206ENST00000531430 KCNJ1P48048 391 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 VPS41P49754 854 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 SARNPP82979 210 aaKnown RBP8.61□□□□□ -1.03
NEDD8-206ENST00000531430 RGS1Q08116 209 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 DHX34Q14147 1143 aaKnown RBP8.61□□□□□ -1.03
NEDD8-206ENST00000531430 RBBP5Q15291 538 aaKnown RBP8.61□□□□□ -1.03
NEDD8-206ENST00000531430 RPS6KA1Q15418 735 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 ZNF750Q32MQ0 723 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 ZNF470Q6ECI4 717 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 RAD9BQ6WBX8 426 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 ABHD13Q7L211 337 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 SLC22A16Q86VW1 577 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 SLC13A5Q86YT5 568 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-206ENST00000531430 CILP2Q8IUL8 1156 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 ZFP62Q8NB50 900 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-206ENST00000531430 GIMAP7Q8NHV1 300 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 CREB3L4Q8TEY5 395 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 ASB15Q8WXK1 588 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 NINJ1Q92982 152 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 ZNF669Q96BR6 464 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-206ENST00000531430 PYCR2Q96C36 320 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 TTYH2Q9BSA4 534 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 FRMD8P1Q9BZ68 369 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-206ENST00000531430 CXXC4Q9H2H0 198 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms