RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CCDC28AQ8IWP9 274 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 SLC38A6Q8IZM9 456 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 ZNF548Q8NEK5 533 aaPredicted RBP11.12□□□□□ -0.63
USP35-207ENST00000530546 IL17RDQ8NFM7 739 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 SMARCD2Q92925 531 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 FAM120BQ96EK7 910 aaKnown RBP11.12□□□□□ -0.63
USP35-207ENST00000530546 ASB16Q96NS5 453 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 VPS35Q96QK1 796 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 IRF2BPLQ9H1B7 796 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 EPS8L2Q9H6S3 715 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 RUBCNLQ9H714 662 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 FKBP14Q9NWM8 211 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 FAM118AQ9NWS6 357 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 ASIC5Q9NY37 505 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 SLC27A6Q9Y2P4 619 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 WBP11Q9Y2W2 641 aaKnown RBP11.12□□□□□ -0.63
USP35-207ENST00000530546 MAGED1Q9Y5V3 778 aaPredicted RBP11.12□□□□□ -0.63
USP35-207ENST00000530546 ELOVL7A1L3X0 281 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 PDZK1P1A8MUH7 402 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 SLC1A7O00341 560 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 QSOX1O00391 747 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 CPSF4O95639 269 aaKnown RBP11.11□□□□□ -0.63
USP35-207ENST00000530546 SOD1P00441 154 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 RB1P06400 928 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 ADRB3P13945 408 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 MAPK1P28482 360 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 VBP1P61758 197 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 ZNF45Q02386 682 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 LAPTM5Q13571 262 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 GAB4Q2WGN9 574 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 FAM98BQ52LJ0 330 aaKnown RBP11.11□□□□□ -0.63
USP35-207ENST00000530546 PNCKQ6P2M8 343 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 CCBE1Q6UXH8 406 aaPredicted RBP11.11□□□□□ -0.63
USP35-207ENST00000530546 RNF165Q6ZSG1 346 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 TMPRSS11BQ86T26 416 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 LSMEM1Q8N8F7 131 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 MCFD2Q8NI22 146 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 TOR3AQ9H497 397 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 DDX28Q9NUL7 540 aaKnown RBP11.11□□□□□ -0.63
USP35-207ENST00000530546 GULP1Q9UBP9 304 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 GPSM3Q9Y4H4 160 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 A3GALT2U3KPV4 340 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 EDDM13A0A1B0GTR0 161 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 AGAP5A6NIR3 686 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 CXCR6O00574 342 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 RFXANKO14593 260 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 TBX1O43435 398 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 APOA1P02647 267 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 EPHX1P07099 455 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 SPNP16150 400 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 ITGB7P26010 798 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 EMX1Q04741 257 aaPredicted RBP11.11□□□□□ -0.63
USP35-207ENST00000530546 TANGO2Q6ICL3 276 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 PLD3Q8IV08 490 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 GALNT12Q8IXK2 581 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 NRSN1Q8IZ57 195 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 SUSD6Q92537 303 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 SDCCAG3Q96C92 435 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 ITCHQ96J02 903 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 FAM129BQ96TA1 746 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 TMEM246Q9BRR3 403 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 REXO4Q9GZR2 422 aaKnown RBP11.11□□□□□ -0.63
USP35-207ENST00000530546 NTN4Q9HB63 628 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 SERHLQ9NQF3 203 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 NFKBIL1Q9UBC1 381 aaPredicted RBP11.11□□□□□ -0.63
USP35-207ENST00000530546 VPS29Q9UBQ0 182 aa11.11□□□□□ -0.63
USP35-207ENST00000530546 MAGEB17A8MXT2 336 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 PRKD3O94806 890 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 ETHE1O95571 254 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 COX7A2P14406 83 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 DDOSTP39656 456 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 SEPHS1P49903 392 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 ACSM2AQ08AH3 577 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 ELAVL3Q14576 367 aaKnown RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 NPTX1Q15818 432 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 NKG7Q16617 165 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 MEP1AQ16819 746 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 LIPJQ5W064 366 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 ACSM2BQ68CK6 577 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 SLC51BQ86UW2 128 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 RIMKLAQ8IXN7 391 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 CACTIN-AS1Q8N1I8 211 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 TMEM132CQ8N3T6 1108 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 PJA1Q8NG27 643 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 KCNH6Q9H252 994 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 KCNN3Q9UGI6 736 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 UNC80Q8N2C7 3258 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 MYO9BQ13459 2157 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 UPK1AO00322 258 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 HAT1O14929 419 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 POP7O75817 140 aaKnown RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 PBX2P40425 430 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 IL12RB1P42701 662 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 MTHFRP42898 656 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 KIR3DL1P43629 444 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 HTR3AP46098 478 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 PPP2R2BQ00005 443 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 MEF2AQ02078 507 aaPredicted RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 CD47Q08722 323 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 ELP6Q0PNE2 266 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms