RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 ANGPTL2Q9UKU9 493 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 MMP17Q9ULZ9 603 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 ICAM5Q9UMF0 924 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 DLGAP4Q9Y2H0 992 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 R3HDM2Q9Y2K5 976 aaKnown RBP4.5□□□□□ -1.69
CSDE1-212ENST00000529046 TSC2P49815 1807 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 SCN1AP35498 2009 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 ANK1P16157 1881 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 DENND4CQ5VZ89 1909 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 IGHV4OR15-8A0A075B7B6 117 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 A0A1W2PQ09 198 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 hCG_1807616A0A1W2PRN6 198 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 PLSCR5A0PG75 271 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 VPS37CA5D8V6 355 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-212ENST00000529046 MAPK13O15264 365 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 STX6O43752 255 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 AHCYL1O43865 530 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 WISP2O76076 250 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 CAVIN2O95810 425 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 RPN1P04843 607 aaKnown RBP4.49□□□□□ -1.69
CSDE1-212ENST00000529046 SNRNP70P08621 437 aaKnown RBP4.49□□□□□ -1.69
CSDE1-212ENST00000529046 KRT19P08727 400 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 CEACAM1P13688 526 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 MYOD1P15172 320 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 PRLRP16471 622 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 ANXA13P27216 316 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 P2RY2P41231 377 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 MSH2P43246 934 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 ZNF132P52740 706 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 PDE1BQ01064 536 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 RELQ04864 619 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-212ENST00000529046 CYP24A1Q07973 514 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 SRSF5Q13243 272 aaKnown RBP4.49□□□□□ -1.69
CSDE1-212ENST00000529046 E2F5Q15329 346 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 SNRNP35Q16560 246 aaKnown RBP4.49□□□□□ -1.69
CSDE1-212ENST00000529046 LPAL2Q16609 132 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 KNOP1Q1ED39 458 aaKnown RBP4.49□□□□□ -1.69
CSDE1-212ENST00000529046 ZNF628Q5EBL2 1059 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 N4BP2L1Q5TBK1 243 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-212ENST00000529046 ZNF704Q6ZNC4 412 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-212ENST00000529046 ASB18Q6ZVZ8 466 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 TUBA1AQ71U36 451 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 TRMT11Q7Z4G4 463 aaKnown RBP4.49□□□□□ -1.69
CSDE1-212ENST00000529046 RABEPKQ7Z6M1 372 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 CUZD1Q86UP6 607 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 UNC93AQ86WB7 457 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 CBWD2Q8IUF1 395 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 CEP97Q8IW35 865 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 PM20D2Q8IYS1 436 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 NUP93Q8N1F7 819 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 CRYBG2Q8N1P7 616 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 IL17RCQ8NAC3 791 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 C1orf131Q8NDD1 294 aaKnown RBP4.49□□□□□ -1.69
CSDE1-212ENST00000529046 STKLD1Q8NE28 680 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 TSTD1Q8NFU3 115 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 RPLP0P6Q8NHW5 317 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 SCFD1Q8WVM8 642 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 DNASE2BQ8WZ79 361 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 TAF4BQ92750 862 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 ZNF396Q96N95 335 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-212ENST00000529046 IL17FQ96PD4 163 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 FNBP1Q96RU3 617 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 TUBA1CQ9BQE3 449 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 FGFBP2Q9BYJ0 223 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 ARRDC1-AS1Q9H2J1 176 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 LINC00597Q9H2U6 94 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 SNX25Q9H3E2 840 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 DMAC2Q9NW81 257 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 PADI1Q9ULC6 663 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 VDAC3Q9Y277 283 aa4.49□□□□□ -1.69
CSDE1-212ENST00000529046 ATP8B3O60423 1300 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 PTPRJQ12913 1337 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 NCOR2Q9Y618 2525 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 LAMA1P25391 3075 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 LNP1A1A4G5 178 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 GOLGA8IPA6NC78 632 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 GOLGA8JA6NMD2 632 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 A8MXQ7 604 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 F8VP50 259 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 PDXKO00764 312 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 CDX4O14627 284 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-212ENST00000529046 HS3ST1O14792 307 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 ZNF217O75362 1048 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 KCNK5O95279 499 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 APODP05090 189 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 P4HA1P13674 534 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 ITGA2P17301 1181 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 TNNI1P19237 187 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 ACAT1P24752 427 aaKnown RBP4.48□□□□□ -1.69
CSDE1-212ENST00000529046 HRH2P25021 359 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 SLC15A1P46059 708 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 SUOXP51687 545 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 ERVFC1-1P60608 527 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 TAF10Q12962 218 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 CDC16Q13042 620 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 GAGE2BQ13066 116 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 CHAF1BQ13112 559 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 HNRNPDQ14103 355 aaKnown RBP4.48□□□□□ -1.69
CSDE1-212ENST00000529046 PDE1CQ14123 709 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-212ENST00000529046 SF3A2Q15428 464 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms