RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 NOP53Q9NZM5 478 aaKnown RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 ZNF282Q9UDV7 671 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 MAP4K5Q9Y4K4 846 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 TMEM184BQ9Y519 407 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 ASB1Q9Y576 335 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 ADAMTS20P59510 1910 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 GNG14A0A1W2PPG7 69 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 GMNCA6NCL1 334 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 LRRC14BA6NHZ5 514 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 MAGEB17A8MXT2 336 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 TCP11X1B4DZS4 312 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 MEN1O00255 615 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 KLHL41O60662 606 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 PRMT3O60678 531 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 EDF1O60869 148 aaKnown RBP7.54□□□□□ -1.2
SSBP3-211ENST00000528787 SEC22BO75396 215 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 STK17BO94768 372 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 SCELO95171 688 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 ONECUT2O95948 504 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 RECKO95980 971 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 CHRNGP07510 517 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 ADRB1P08588 477 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 RAB40ALP0C0E4 278 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 LIPCP11150 499 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 RNH1P13489 461 aaKnown RBP7.54□□□□□ -1.2
SSBP3-211ENST00000528787 LBPP18428 481 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 TSPAN8P19075 237 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 FBLP22087 321 aaKnown RBP7.54□□□□□ -1.2
SSBP3-211ENST00000528787 ALAS2P22557 587 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 PCBP4P57723 403 aaKnown RBP7.54□□□□□ -1.2
SSBP3-211ENST00000528787 STX1BP61266 288 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 RPS13P62277 151 aaKnown RBP7.54□□□□□ -1.2
SSBP3-211ENST00000528787 CYP4F2P78329 520 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 LRRC74AQ0VAA2 488 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 KCNAB1Q14722 419 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 RPS6KA2Q15349 733 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 NR6A1Q15406 480 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 GSTA3Q16772 222 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 DPY19L1Q2PZI1 675 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 CCNYL2Q5T2Q4 361 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 ARHGAP40Q5TG30 622 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 OR4C11Q6IEV9 310 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 GALNT18Q6P9A2 607 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 FOXR1Q6PIV2 292 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 TTLL10Q6ZVT0 673 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 TMPRSS9Q7Z410 1059 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 VN1R4Q7Z5H5 301 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 R3HCC1LQ7Z5L2 792 aaKnown RBP7.54□□□□□ -1.2
SSBP3-211ENST00000528787 METTL4Q8N3J2 472 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 ZNF781Q8N8C0 355 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 ANKS4BQ8N8V4 417 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 ANKRD53Q8N9V6 530 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 ZSCAN1Q8NBB4 408 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 OR1L3Q8NH93 324 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 ACTRT2Q8TDY3 377 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 UTP15Q8TED0 518 aaKnown RBP7.54□□□□□ -1.2
SSBP3-211ENST00000528787 TUBGCP3Q96CW5 907 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 MS4A6EQ96DS6 147 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 MMABQ96EY8 250 aaPredicted RBP7.54□□□□□ -1.2
SSBP3-211ENST00000528787 CDK15Q96Q40 435 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 PELOQ9BRX2 385 aaKnown RBP7.54□□□□□ -1.2
SSBP3-211ENST00000528787 CCDC28BQ9BUN5 200 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 DPH1Q9BZG8 443 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 DDX31Q9H8H2 851 aaKnown RBP7.54□□□□□ -1.2
SSBP3-211ENST00000528787 MEAF6Q9HAF1 191 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 LRTM1Q9HBL6 345 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 GIMAP4Q9NUV9 329 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 ATAD3AQ9NVI7 634 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 OCIAD1Q9NX40 245 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 DKK4Q9UBT3 224 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 C19orf25Q9UFG5 118 aaPredicted RBP7.54□□□□□ -1.2
SSBP3-211ENST00000528787 ZDHHC2Q9UIJ5 367 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 MCM8Q9UJA3 840 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 ANGPTL2Q9UKU9 493 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 KLHL20Q9Y2M5 609 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 DNAJC15Q9Y5T4 150 aa7.54□□□□□ -1.2
SSBP3-211ENST00000528787 SEC16AO15027 2179 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 DNAH14Q0VDD8 3507 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 LOC105369274A0A096LPK9 316 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 LOC102723532A0A0G2JNH3 316 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 C1orf226A1L170 272 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 DYTNA2CJ06 578 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 CDRT15L2A8MXV6 281 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 UBFD1O14562 309 aaKnown RBP7.53□□□□□ -1.2
SSBP3-211ENST00000528787 RRP8O43159 456 aaKnown RBP7.53□□□□□ -1.2
SSBP3-211ENST00000528787 HYAL3O43820 417 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-211ENST00000528787 LCMT2O60294 686 aaKnown RBP7.53□□□□□ -1.2
SSBP3-211ENST00000528787 GALR3O60755 368 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-211ENST00000528787 KIAA0754O94854 1291 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 KLHL18O94889 574 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 SLITRK5O94991 958 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 TGFB1P01137 390 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 ZNF888P0CJ79 500 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-211ENST00000528787 DRD2P14416 443 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 IDO1P14902 403 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 ALOX15P16050 662 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-211ENST00000528787 CD22P20273 847 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 HIST1H1TP22492 207 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-211ENST00000528787 MAPK12P53778 367 aa7.53□□□□□ -1.2
SSBP3-211ENST00000528787 CLNS1AP54105 237 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms