RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 SNX15Q9NRS6 342 aa31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 PTGFRNQ9P2B2 879 aa31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 PRAMEF4O60810 478 aa31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 SEC24DO94855 1032 aaPredicted RBP31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 C2P06681 752 aa31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 ITGAMP11215 1152 aa31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 ECHS1P30084 290 aa31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 PCDH1Q08174 1060 aa31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 EXT1Q16394 746 aa31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 TOR1AIP1Q5JTV8 583 aa31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 PRAMEF9Q5VWM5 478 aa31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 FAM26EQ8N5C1 309 aa31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 CISD2Q8N5K1 135 aaKnown RBP31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 ESAMQ96AP7 390 aa31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 RBCK1Q9BYM8 510 aa31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 RNF32Q9H0A6 362 aa31.11■■■□□ 2.57
SSSCA1-205ENST00000527920 HECTD1Q9ULT8 2610 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 DYTNA2CJ06 578 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 LRIT2A6NDA9 550 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 OR2W5A6NFC9 320 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 SYCE1LA8MT33 242 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 B3GALT4O96024 378 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 CELA2AP08217 269 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 RNH1P13489 461 aaKnown RBP31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 EPORP19235 508 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 GNLYP22749 145 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 HNF4AP41235 474 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 CASP2P42575 452 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 UQCRFS1P47985 274 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 LAPTM5Q13571 262 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 BMPR2Q13873 1038 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 ADPRMQ3LIE5 342 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 FBXO48Q5FWF7 155 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 XKR6Q5GH73 641 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 PAGE2BQ5JRK9 111 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 QSOX2Q6ZRP7 698 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 SIRT6Q8N6T7 355 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 IFT81Q8WYA0 676 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 HAS2Q92819 552 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 EXT2Q93063 718 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 NXNL1Q96CM4 212 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 C19orf60Q96EN9 201 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 ASF1BQ9NVP2 202 aa31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 COPG1Q9Y678 874 aaKnown RBP31.1■■■□□ 2.57
SSSCA1-205ENST00000527920 IGHV3-20A0A0C4DH32 117 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 ANKDD1BA6NHY2 528 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 TCP11X1B4DZS4 312 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 SUPT3HB4E1H0 165 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 C4orf51C9J302 202 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 CCNT2O60583 730 aaKnown RBP31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 DNAJB6O75190 326 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 SUPT3HO75486 399 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 CDC123O75794 336 aaPredicted RBP31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 SERPINB8P50452 374 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 OLR1P78380 273 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 DOC2AQ14183 400 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 KCTD4Q8WVF5 259 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 SLC44A1Q8WWI5 657 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 MS4A6EQ96DS6 147 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 RHBGQ9H310 441 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 TEKT2Q9UIF3 430 aa31.09■■■□□ 2.57
SSSCA1-205ENST00000527920 USP9XQ93008 2570 aaPredicted RBP31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 A0A088AWK7 358 aa31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 ALDOAP04075 364 aaKnown RBP31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 ZNF10P21506 573 aaPredicted RBP31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 HNRNPH1P31943 449 aaKnown RBP31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 GLRBP48167 497 aa31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 SRSF1Q07955 248 aaKnown RBP eCLIP31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 ACAP2Q15057 778 aa31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 UAP1Q16222 522 aaPredicted RBP31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 BTBD16Q32M84 506 aa31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 UBAP2Q5T6F2 1119 aaKnown RBP31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 RPUSD3Q6P087 351 aaKnown RBP31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 CEP112Q8N8E3 955 aa31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 M1APQ8TC57 530 aa31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 MRRFQ96E11 262 aaKnown RBP31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 CNDP1Q96KN2 507 aa31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 LPAR4Q99677 370 aa31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 NPLQ9BXD5 320 aaPredicted RBP31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 MAP10Q9P2G4 905 aa31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 ZNF490Q9ULM2 529 aaPredicted RBP31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 ASB1Q9Y576 335 aa31.08■■■□□ 2.57
SSSCA1-205ENST00000527920 K7EPI3 171 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 UBXN8O00124 270 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 PSMD12O00232 456 aaPredicted RBP31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 ACSL3O95573 720 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 MTHFD2P13995 350 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 CD22P20273 847 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 ARG2P78540 354 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 IRF8Q02556 426 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 SFT2D3Q587I9 215 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 H3F3CQ6NXT2 135 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 PAPD4Q6PIY7 484 aaKnown RBP31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 VN1R5Q7Z5H4 357 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 TSLPQ969D9 159 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 ISL2Q96A47 359 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 FAR2Q96K12 515 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 MMP25Q9NPA2 562 aa31.07■■■□□ 2.56
SSSCA1-205ENST00000527920 A0A096LPK6 155 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 PRMT3O60678 531 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms