RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 DEFB134Q4QY38 66 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 TOR1AIP1Q5JTV8 583 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 BEND6Q5SZJ8 279 aaPredicted RBP16.33■□□□□ 0.2
LMX1B-203ENST00000526117 PPP1R32Q7Z5V6 425 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 C4orf33Q8N1A6 199 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 TMEM102Q8N9M5 508 aaPredicted RBP16.33■□□□□ 0.2
LMX1B-203ENST00000526117 OR52B6Q8NGF0 335 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 OR51Q1Q8NH59 317 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 WDR20Q8TBZ3 569 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 EXTL1Q92935 676 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 CMTM7Q96FZ5 175 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 NSUN5Q96P11 429 aaKnown RBP16.33■□□□□ 0.2
LMX1B-203ENST00000526117 QRFPRQ96P65 431 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 KCNC2Q96PR1 638 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 ZNF382Q96SR6 550 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 ROGDIQ9GZN7 287 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 SSU72Q9NP77 194 aaKnown RBP16.33■□□□□ 0.2
LMX1B-203ENST00000526117 PLLPQ9Y342 182 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 NUP210LQ5VU65 1888 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 FAM208BQ5VWN6 2430 aa16.33■□□□□ 0.2
LMX1B-203ENST00000526117 C4orf51C9J302 202 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 AGPSO00116 658 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 RDH16O75452 317 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 SCELO95171 688 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 SFTPCP11686 197 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 PHEXP78562 749 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 CLCQ05315 142 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 DEFB109BQ30KR1 87 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 UNC50Q53HI1 259 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 VWA2Q5GFL6 755 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 FAM69BQ5VUD6 431 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 TRIM40Q6P9F5 258 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 ABHD17CQ6PCB6 329 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 CHSY3Q70JA7 882 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 SRRM1Q8IYB3 904 aaKnown RBP16.32■□□□□ 0.2
LMX1B-203ENST00000526117 HUS1BQ8NHY5 278 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 ADAMTS18Q8TE60 1221 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 PGM2Q96G03 612 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 FER1L6-AS2Q96M78 137 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 ZIM3Q96PE6 472 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 SMC6Q96SB8 1091 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 CRB3Q9BUF7 120 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 KLHL31Q9H511 634 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 SOX17Q9H6I2 414 aaPredicted RBP16.32■□□□□ 0.2
LMX1B-203ENST00000526117 DMRT3Q9NQL9 472 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 OXSMQ9NWU1 459 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 TRPS1Q9UHF7 1281 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 RNF11Q9Y3C5 154 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 ACTL7BQ9Y614 415 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 HS3ST3B1Q9Y662 390 aa16.32■□□□□ 0.2
LMX1B-203ENST00000526117 KALRNO60229 2985 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 LOC102723996A0A087X1L8 192 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 IDSB3KWA1 339 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 SOCS6O14544 535 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 ERI3O43414 337 aaKnown RBP16.31■□□□□ 0.2
LMX1B-203ENST00000526117 XCR1P46094 333 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 SOX8P57073 446 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 ZNF33BQ06732 778 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 LCP2Q13094 533 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 CUL3Q13618 768 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 SYT16Q17RD7 645 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 DEPDC1Q5TB30 811 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 KHDRBS2Q5VWX1 349 aaKnown RBP16.31■□□□□ 0.2
LMX1B-203ENST00000526117 ADNP2Q6IQ32 1131 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 TMEM205Q6UW68 189 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 CCT6BQ92526 530 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 ATP6V1E2Q96A05 226 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 FAR2Q96K12 515 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 SERINC2Q96SA4 455 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 TBCDQ9BTW9 1192 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 IQCGQ9H095 443 aaKnown RBP16.31■□□□□ 0.2
LMX1B-203ENST00000526117 SEMA4BQ9NPR2 832 aaPredicted RBP16.31■□□□□ 0.2
LMX1B-203ENST00000526117 RRAGDQ9NQL2 400 aaPredicted RBP16.31■□□□□ 0.2
LMX1B-203ENST00000526117 C3orf18Q9UK00 162 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 PCSK5Q92824 1860 aa16.31■□□□□ 0.2
LMX1B-203ENST00000526117 PEX12O00623 359 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 RGS16O15492 202 aaPredicted RBP16.3■□□□□ 0.2
LMX1B-203ENST00000526117 CHST10O43529 356 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 TYROBPO43914 113 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 CEACAM4O75871 244 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 SUPT7LO94864 414 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 SEMA3DO95025 777 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 PCNAP12004 261 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 RNH1P13489 461 aaKnown RBP16.3■□□□□ 0.2
LMX1B-203ENST00000526117 CPA3P15088 417 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 JAK1P23458 1154 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 PTX3P26022 381 aaPredicted RBP16.3■□□□□ 0.2
LMX1B-203ENST00000526117 OTX2P32243 289 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 EMP2P54851 167 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 PKNOX1P55347 436 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 POLE2P56282 527 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 RAB8AP61006 207 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 MAT1AQ00266 395 aaKnown RBP16.3■□□□□ 0.2
LMX1B-203ENST00000526117 ATP1A4Q13733 1029 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 COL9A2Q14055 689 aaPredicted RBP16.3■□□□□ 0.2
LMX1B-203ENST00000526117 ZRSR2Q15696 482 aaKnown RBP16.3■□□□□ 0.2
LMX1B-203ENST00000526117 CPSF6Q16630 551 aaKnown RBP eCLIP16.3■□□□□ 0.2
LMX1B-203ENST00000526117 TUBB8Q3ZCM7 444 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 FRG2Q64ET8 278 aa16.3■□□□□ 0.2
LMX1B-203ENST00000526117 LETMD1Q6P1Q0 360 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms