RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 NACAP1Q9BZK3 213 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 DPEP2Q9H4A9 486 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 GMEB2Q9UKD1 530 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 GPR132Q9UNW8 380 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 MYH15Q9Y2K3 1946 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 COL5A2P05997 1499 aaPredicted RBP3.55□□□□□ -1.84
CD44-215ENST00000525241 PFASO15067 1338 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 OOEPA6NGQ2 149 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 ANKDD1BA6NHY2 528 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 ZNF732B4DXR9 585 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 LMO7DNF2Z398 122 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 SIGLEC5O15389 551 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 SCO2O43819 266 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 MTRF1O75570 445 aaKnown RBP3.55□□□□□ -1.84
CD44-215ENST00000525241 RPLP0P05388 317 aaKnown RBP3.55□□□□□ -1.84
CD44-215ENST00000525241 GATA1P15976 413 aaPredicted RBP3.55□□□□□ -1.84
CD44-215ENST00000525241 GIFP27352 417 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 CCND3P30281 292 aaPredicted RBP3.55□□□□□ -1.84
CD44-215ENST00000525241 FEN1P39748 380 aaKnown RBP3.55□□□□□ -1.84
CD44-215ENST00000525241 IER3P46695 156 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 NDST2P52849 883 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 ERVK-16P61578 105 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 LMO4P61968 165 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 RPP38P78345 283 aaKnown RBP3.55□□□□□ -1.84
CD44-215ENST00000525241 CETN1Q12798 172 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 ABRQ12979 859 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 ARMCX4Q5H9R4 360 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.55□□□□□ -1.84
CD44-215ENST00000525241 TCEAL6Q6IPX3 200 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 PODNL1Q6PEZ8 512 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 Q6ZVQ6 151 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 FAM131BQ86XD5 332 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 ATAD1Q8NBU5 361 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 OR9Q2Q8NGE9 314 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 OR52B6Q8NGF0 335 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 OR5M9Q8NGP3 310 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 AFAP1L1Q8TED9 768 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 PCDHB18PQ96TA0 734 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 PYGO2Q9BRQ0 406 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 PANK3Q9H999 370 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 MRPL17Q9NRX2 175 aaKnown RBP3.55□□□□□ -1.84
CD44-215ENST00000525241 PDRG1Q9NUG6 133 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 TMOD3Q9NYL9 352 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 CTSZQ9UBR2 303 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 KLK11Q9UBX7 282 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 PILRAQ9UKJ1 303 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 MRPS18CQ9Y3D5 142 aaKnown RBP3.55□□□□□ -1.84
CD44-215ENST00000525241 MMP24Q9Y5R2 645 aa3.55□□□□□ -1.84
CD44-215ENST00000525241 PCNX3Q9H6A9 2034 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 A0A1W2PRQ8 180 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 A8MXK9 166 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 TRAFD1O14545 582 aaPredicted RBP3.54□□□□□ -1.84
CD44-215ENST00000525241 SLU7O95391 586 aaKnown RBP3.54□□□□□ -1.84
CD44-215ENST00000525241 CTNNA2P26232 953 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 MS4A2Q01362 244 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 CD300CQ08708 224 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 KIAA0141Q14154 515 aaPredicted RBP3.54□□□□□ -1.84
CD44-215ENST00000525241 MEP1BQ16820 701 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 MS4A18Q3C1V0 323 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 PM20D1Q6GTS8 502 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 SLC27A4Q6P1M0 643 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 TMEM99Q8N816 258 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 CHPT1Q8WUD6 406 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 CKAP2Q8WWK9 683 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 C11orf52Q96A22 123 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 GAL3ST4Q96RP7 486 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 ZWILCHQ9H900 591 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 GRPEL1Q9HAV7 217 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 GPN1Q9HCN4 374 aaPredicted RBP3.54□□□□□ -1.84
CD44-215ENST00000525241 TUFT1Q9NNX1 390 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 IL1RAPQ9NPH3 570 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 GPR173Q9NS66 373 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 MRGBPQ9NV56 204 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 SEPT10Q9P0V9 454 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 VPS18Q9P253 973 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 ARMCX3Q9UH62 379 aaPredicted RBP3.54□□□□□ -1.84
CD44-215ENST00000525241 ZNF510Q9Y2H8 683 aa3.54□□□□□ -1.84
CD44-215ENST00000525241 IQCMA0A1B0GVH7 501 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 ERI2A8K979 691 aaKnown RBP3.53□□□□□ -1.84
CD44-215ENST00000525241 TNFSF12O43508 249 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 NME6O75414 186 aaPredicted RBP3.53□□□□□ -1.84
CD44-215ENST00000525241 POP4O95707 220 aaKnown RBP3.53□□□□□ -1.84
CD44-215ENST00000525241 GATA2P23769 480 aaPredicted RBP3.53□□□□□ -1.84
CD44-215ENST00000525241 PKLRP30613 574 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 KRT2P35908 639 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 DSCR10P59022 87 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 CNTN1Q12860 1018 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 ZNF146Q15072 292 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 SLC1A5Q15758 541 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 MAPK11Q15759 364 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 UPP1Q16831 310 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 IQCCQ4KMZ1 466 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 C17orf107Q6ZR85 190 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 ABHD12Q8N2K0 398 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 KIAA0895Q8NCT3 520 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 C17orf47Q8NEP4 570 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 RASL10BQ96S79 203 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 SOSTQ9BQB4 213 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 TRIM6Q9C030 488 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms