RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 PPP4R1Q8TF05 950 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 SLC13A3Q8WWT9 602 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 CCT6BQ92526 530 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 GATA6Q92908 595 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 ATP6V1E2Q96A05 226 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 MS4A6EQ96DS6 147 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 APIPQ96GX9 242 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 CNDP1Q96KN2 507 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 SLC46A1Q96NT5 459 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 AIF1LQ9BQI0 150 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 MS4A8Q9BY19 250 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 ACPTQ9BZG2 426 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 STMN4Q9H169 189 aaPredicted RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 EHD1Q9H4M9 534 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 NT5DC2Q9H857 520 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 MANSC1Q9H8J5 431 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 POLR1BQ9H9Y6 1135 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 FBXO8Q9NRD0 319 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 INTS9Q9NV88 658 aaKnown RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 ANKMY1Q9P2S6 941 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 MARCOQ9UEW3 520 aaPredicted RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 TRPS1Q9UHF7 1281 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 ZFP69BQ9UJL9 534 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 HAO1Q9UJM8 370 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 TRAF6Q9Y4K3 522 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 DNAJC15Q9Y5T4 150 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 ZFHX4Q86UP3 3567 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 CCDC88CQ9P219 2028 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 LOC101059948A0A1B0GTJ6 334 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 ATP6AP2A0A1C7CYW4 349 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 HYKKA2RU49 373 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 LRIT2A6NDA9 550 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 C1QTNF9BB2RNN3 333 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 TGFBR3LH3BV60 316 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 MASP2O00187 686 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 TAF4O00268 1085 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 SDHDO14521 159 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 TERTO14746 1132 aaKnown RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 AZIN1O14977 448 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 PIP5K1BO14986 540 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 POLR1CO15160 346 aaPredicted RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 POLR3GO15318 223 aaPredicted RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 ZSCAN9O15535 394 aaPredicted RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 NDUFS4O43181 175 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 EFSO43281 561 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 TMPRSS11DO60235 418 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 H2AFYO75367 372 aaKnown RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 RDH16O75452 317 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 SKAP2O75563 359 aaPredicted RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 SCRG1O75711 98 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 ATP6AP2O75787 350 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 OR2B3O76000 313 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 STK17BO94768 372 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 FKBP9O95302 570 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 MLYCDO95822 493 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 OTCP00480 354 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 MSL3P1P0C860 447 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 C1QTNF9P0C862 333 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 JMJD7P0C870 316 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 SDHBP21912 280 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 BSGP35613 385 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 AHRP35869 848 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 ARL1P40616 181 aaPredicted RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 ARL4DP49703 201 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 HNRNPFP52597 415 aaKnown RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 PLA2G16P53816 162 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 PKNOX1P55347 436 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 RPS18P62269 152 aaKnown RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 BTN3A2P78410 334 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 ACY1Q03154 408 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 RELAQ04206 551 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 GALNT1Q10472 559 aaPredicted RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 POU4F2Q12837 409 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 KIAA0040Q15053 153 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 PDCD2Q16342 344 aaPredicted RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 ADPRMQ3LIE5 342 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 SLC9B1Q4ZJI4 515 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 ZC3H12BQ5HYM0 836 aaKnown RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 DEPDC1Q5TB30 811 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 FRG2Q64ET8 278 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 METTL2BQ6P1Q9 378 aaKnown RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 ABHD17CQ6PCB6 329 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 TTLL10Q6ZVT0 673 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 PRICKLE2Q7Z3G6 844 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 WDR75Q8IWA0 830 aaKnown RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 LRRC34Q8IZ02 419 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 CARFQ8N187 725 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 GALNT15Q8N3T1 639 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 GOLGA6L1Q8N7Z2 621 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 OR8K5Q8NH50 307 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 RNF217Q8TC41 542 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 METTL6Q8TCB7 284 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 TWIST2Q8WVJ9 160 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 CCDC126Q96EE4 140 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 NAF1Q96HR8 494 aaKnown RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 GBP5Q96PP8 586 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 FRG2BQ96QU4 278 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 TAAR9Q96RI9 348 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 CMKLR1Q99788 373 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 EFCAB11Q9BUY7 163 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms