RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 FPR3P25089 353 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 RFC1P35251 1148 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-209ENST00000525132 MATR3P43243 847 aaKnown RBP eCLIP2.92□□□□□ -1.94
CSDE1-209ENST00000525132 VPS41P49754 854 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 RAB28P51157 221 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 CLCN3P51790 818 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 TPTEP56180 551 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 NLRP11P59045 1033 aaKnown RBP2.92□□□□□ -1.94
CSDE1-209ENST00000525132 TUBB4BP68371 445 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 ACSM2AQ08AH3 577 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 IFT88Q13099 833 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 RPA4Q13156 261 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 RCN2Q14257 317 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 SEMA3AQ14563 771 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 ZNF273Q14593 569 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 CNGA3Q16281 694 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 MEP1BQ16820 701 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 CXorf66Q5JRM2 361 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-209ENST00000525132 TMEM268Q5VZI3 342 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 ACSM2BQ68CK6 577 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 GALNT17Q6IS24 598 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 CEP85Q6P2H3 762 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 ZNF782Q6ZMW2 699 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-209ENST00000525132 CFAP77Q6ZQR2 320 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 SATL1Q86VE3 508 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 IQCHQ86VS3 1027 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 FAM217AQ8IXS0 508 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 SYCP3Q8IZU3 236 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 GUF1Q8N442 669 aaKnown RBP2.92□□□□□ -1.94
CSDE1-209ENST00000525132 IQUBQ8NA54 791 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 MIGA1Q8NAN2 632 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 XXYLT1Q8NBI6 393 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 TSPAN14Q8NG11 270 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 PTPMT1Q8WUK0 201 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-209ENST00000525132 TEKT4Q8WW24 435 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 GTF3AQ92664 365 aaKnown RBP2.92□□□□□ -1.94
CSDE1-209ENST00000525132 ART4Q93070 314 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 PIGTQ969N2 578 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 RITA1Q96K30 269 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 PKNOX2Q96KN3 472 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 LINC00615Q96LM1 132 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-209ENST00000525132 ADAD1Q96M93 576 aaKnown RBP2.92□□□□□ -1.94
CSDE1-209ENST00000525132 TSGA13Q96PP4 275 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 CCT8L2Q96SF2 557 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 CDRT15Q96T59 188 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 MGME1Q9BQP7 344 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 ADGRE3Q9BY15 652 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 NUF2Q9BZD4 464 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 GOLPH3LQ9H4A5 285 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 IL1RAPL2Q9NP60 686 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 HPF1Q9NWY4 346 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 GPR83Q9NYM4 423 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 NYAP2Q9P242 653 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 CRNNQ9UBG3 495 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-209ENST00000525132 KCNG2Q9UJ96 466 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 FZD4Q9ULV1 537 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 ICKQ9UPZ9 632 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 KCNK7Q9Y2U2 307 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 AAR2Q9Y312 384 aaKnown RBP2.92□□□□□ -1.94
CSDE1-209ENST00000525132 FAM96BQ9Y3D0 163 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 CSAG2Q9Y5P2 127 aa2.92□□□□□ -1.94
CSDE1-209ENST00000525132 DYNC1H1Q14204 4646 aaKnown RBP2.92□□□□□ -1.94
CSDE1-209ENST00000525132 DOCK5Q9H7D0 1870 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 TMEM247A6NEH6 219 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 NEMP2A6NFY4 417 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 NPIPB11E5RHQ5 1161 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 PRYO14603 147 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 KLK8O60259 260 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 SLC19A2O60779 497 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 GPC4O75487 556 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 GCNT3O95395 438 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 VNN2O95498 520 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 NFATC1O95644 943 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 GUCA1CO95843 209 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 OLFM2O95897 454 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 BCL10O95999 233 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 STATHP02808 62 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 CELA2AP08217 269 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 NPSP0C0P6 89 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 RFPL3SP0C7P2 107 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 SRCP12931 536 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 PDGFRAP16234 1089 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ITGAXP20702 1163 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 NDUFS1P28331 727 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ASIPP42127 132 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 THOP1P52888 689 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ARSFP54793 590 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 SLC12A3P55017 1021 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 TPD52P55327 224 aaPredicted RBP2.91□□□□□ -1.94
CSDE1-209ENST00000525132 CFHR3Q02985 330 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ZBTB16Q05516 673 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 DLG2Q15700 870 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 RPE65Q16518 533 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 SNAPC1Q16533 368 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 TYSND1Q2T9J0 566 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ANKRD20A4Q4UJ75 823 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ANKRD20A8PQ5CZ79 823 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ARL13AQ5H913 290 aaPredicted RBP2.91□□□□□ -1.94
CSDE1-209ENST00000525132 DEFB121Q5J5C9 76 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ANKRD20A2Q5SQ80 823 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms