RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 SLC6A16Q9GZN6 736 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 C20orf27Q9GZN8 174 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 REXO4Q9GZR2 422 aaKnown RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 CHRNA10Q9GZZ6 450 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 ELOVL6Q9H5J4 265 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 ANKHQ9HCJ1 492 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 DMRT3Q9NQL9 472 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 MKS1Q9NXB0 559 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 FBXW2Q9UKT8 454 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 TMCO1Q9UM00 188 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 SLC12A4Q9UP95 1085 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 SRPK3Q9UPE1 567 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 FARSAQ9Y285 508 aaKnown RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 PCDHGA11Q9Y5H2 935 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 PIEZO1Q92508 2521 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 PIKFYVEQ9Y2I7 2098 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 ATP6AP2A0A1C7CYW4 349 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 A0A1W2PS29 197 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ARGFXA6NJG6 315 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 A6NL46 340 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 C9J4A7 227 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 PLPP1O14494 284 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 TMPRSS11DO60235 418 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 GALR3O60755 368 aaPredicted RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 CLEC3AO75596 197 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 CREG1O75629 220 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ATP6AP2O75787 350 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 KLF7O75840 302 aaPredicted RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 DNAJB5O75953 348 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 NSA2O95478 260 aaKnown RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ESRRBO95718 433 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 HSPA4LO95757 839 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 MLYCDO95822 493 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 JUNP05412 331 aaKnown RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 KLK1P06870 262 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 UMODP07911 640 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 SERPINA6P08185 405 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 CELA2AP08217 269 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 HBQ1P09105 142 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ZGLP1P0C6A0 271 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 DHRS4L1P0CG22 281 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 SMIM10L1P0DMW3 83 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 KITP10721 976 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 MAOAP21397 527 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ATP5A1P25705 553 aaKnown RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 CD82P27701 267 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 PTPN4P29074 926 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 PPP2R1BP30154 601 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 AHRP35869 848 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 FOLR3P41439 243 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 CASP2P42575 452 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 SSR2P43308 183 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 XCR1P46094 333 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 AVPR1BP47901 424 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 DNAJB13P59910 316 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 STXBP1P61764 594 aaKnown RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 RPS15P62841 145 aaKnown RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 OCA2Q04671 838 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 EEF1A2Q05639 463 aaKnown RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 KLC1Q07866 573 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 LCP2Q13094 533 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 IFT88Q13099 833 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 STX3Q13277 289 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 SLAMF1Q13291 335 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 PWP1Q13610 501 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ATP1A4Q13733 1029 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 RCN2Q14257 317 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 NAA25Q14CX7 972 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 NKG7Q16617 165 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF750Q32MQ0 723 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 MINDY4Q4G0A6 757 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 SPDYAQ5MJ70 313 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 AGBL2Q5U5Z8 902 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 BROXQ5VW32 411 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 KHDRBS2Q5VWX1 349 aaKnown RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 FRG2Q64ET8 278 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 CPZQ66K79 652 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 C18orf63Q68DL7 685 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 TRIM40Q6P9F5 258 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 CYB5D1Q6P9G0 228 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ABHD17CQ6PCB6 329 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF517Q6ZMY9 492 aaPredicted RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ABHD13Q7L211 337 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 OVCH1Q7RTY7 1134 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 CUZD1Q86UP6 607 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 LCA5Q86VQ0 697 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 BPHLQ86WA6 291 aaPredicted RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ZC3H7AQ8IWR0 971 aaKnown RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 OR4N5Q8IXE1 308 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 DDIASQ8IXT1 998 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 CA13Q8N1Q1 262 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 C1orf52Q8N6N3 182 aaKnown RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 EFCAB3Q8N7B9 438 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 GOLGA6L1Q8N7Z2 621 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF781Q8N8C0 355 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 L3MBTL4Q8NA19 623 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 OR2L5Q8NG80 312 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 OR2T11Q8NH01 316 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 OR51Q1Q8NH59 317 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms