RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 C4orf33Q8N1A6 199 aa14.3□□□□□ -0.12
SF3B2-202ENST00000524475 TMEM102Q8N9M5 508 aaPredicted RBP14.3□□□□□ -0.12
SF3B2-202ENST00000524475 SRFBP1Q8NEF9 429 aaKnown RBP14.3□□□□□ -0.12
SF3B2-202ENST00000524475 OR52B6Q8NGF0 335 aa14.3□□□□□ -0.12
SF3B2-202ENST00000524475 EXTL1Q92935 676 aa14.3□□□□□ -0.12
SF3B2-202ENST00000524475 VPS50Q96JG6 964 aa14.3□□□□□ -0.12
SF3B2-202ENST00000524475 TMEM237Q96Q45 408 aa14.3□□□□□ -0.12
SF3B2-202ENST00000524475 REXO4Q9GZR2 422 aaKnown RBP14.3□□□□□ -0.12
SF3B2-202ENST00000524475 MAN2B2Q9Y2E5 1009 aa14.3□□□□□ -0.12
SF3B2-202ENST00000524475 PLLPQ9Y342 182 aa14.3□□□□□ -0.12
SF3B2-202ENST00000524475 SPTA1P02549 2419 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 SGK494L7N484 410 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 FOXE1O00358 373 aaPredicted RBP14.29□□□□□ -0.12
SF3B2-202ENST00000524475 RDH16O75452 317 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 MLYCDO95822 493 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 MYL2P10916 166 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 SFTPCP11686 197 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 TSFMP43897 325 aaKnown RBP14.29□□□□□ -0.12
SF3B2-202ENST00000524475 RRADP55042 308 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 PHEXP78562 749 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 CLCQ05315 142 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 TGM3Q08188 693 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 DEFB109BQ30KR1 87 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 KRT71Q3SY84 523 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 UNC50Q53HI1 259 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 VWA2Q5GFL6 755 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 TNFAIP8L3Q5GJ75 292 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 TOR1AIP1Q5JTV8 583 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 FAM69BQ5VUD6 431 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 TRIM40Q6P9F5 258 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 ABHD17CQ6PCB6 329 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 OR51Q1Q8NH59 317 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 WDR20Q8TBZ3 569 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 CMTM7Q96FZ5 175 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 NSUN5Q96P11 429 aaKnown RBP14.29□□□□□ -0.12
SF3B2-202ENST00000524475 QRFPRQ96P65 431 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 KCNC2Q96PR1 638 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 ZNF382Q96SR6 550 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 CRB3Q9BUF7 120 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 ROGDIQ9GZN7 287 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 KLHL31Q9H511 634 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 SOX17Q9H6I2 414 aaPredicted RBP14.29□□□□□ -0.12
SF3B2-202ENST00000524475 MED13Q9UHV7 2174 aa14.29□□□□□ -0.12
SF3B2-202ENST00000524475 IDSB3KWA1 339 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 C4orf51C9J302 202 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 H3BQF6 201 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 AGPSO00116 658 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 CTIFO43310 598 aaKnown RBP14.28□□□□□ -0.12
SF3B2-202ENST00000524475 ERI3O43414 337 aaKnown RBP14.28□□□□□ -0.12
SF3B2-202ENST00000524475 SCELO95171 688 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 OTX2P32243 289 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 XCR1P46094 333 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 RAB8AP61006 207 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 MAT1AQ00266 395 aaKnown RBP14.28□□□□□ -0.12
SF3B2-202ENST00000524475 LCP2Q13094 533 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 COL9A2Q14055 689 aaPredicted RBP14.28□□□□□ -0.12
SF3B2-202ENST00000524475 DEPDC1Q5TB30 811 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 ADNP2Q6IQ32 1131 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 CHSY3Q70JA7 882 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 SRRM1Q8IYB3 904 aaKnown RBP14.28□□□□□ -0.12
SF3B2-202ENST00000524475 HUS1BQ8NHY5 278 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 ADAMTS18Q8TE60 1221 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 PPP4R1Q8TF05 950 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 CCT6BQ92526 530 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 PCSK5Q92824 1860 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 ATP6V1E2Q96A05 226 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 FAR2Q96K12 515 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 FER1L6-AS2Q96M78 137 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 ZIM3Q96PE6 472 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 SMC6Q96SB8 1091 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 TBCDQ9BTW9 1192 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 IQCGQ9H095 443 aaKnown RBP14.28□□□□□ -0.12
SF3B2-202ENST00000524475 SSU72Q9NP77 194 aaKnown RBP14.28□□□□□ -0.12
SF3B2-202ENST00000524475 SEMA4BQ9NPR2 832 aaPredicted RBP14.28□□□□□ -0.12
SF3B2-202ENST00000524475 RRAGDQ9NQL2 400 aaPredicted RBP14.28□□□□□ -0.12
SF3B2-202ENST00000524475 DMRT3Q9NQL9 472 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 OXSMQ9NWU1 459 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 TRPS1Q9UHF7 1281 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 C3orf18Q9UK00 162 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 RNF11Q9Y3C5 154 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 ACTL7BQ9Y614 415 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 HS3ST3B1Q9Y662 390 aa14.28□□□□□ -0.12
SF3B2-202ENST00000524475 CFAP46Q8IYW2 2715 aa14.27□□□□□ -0.12
SF3B2-202ENST00000524475 LOC102723996A0A087X1L8 192 aa14.27□□□□□ -0.13
SF3B2-202ENST00000524475 PEX12O00623 359 aa14.27□□□□□ -0.13
SF3B2-202ENST00000524475 SOCS6O14544 535 aa14.27□□□□□ -0.13
SF3B2-202ENST00000524475 RGS16O15492 202 aaPredicted RBP14.27□□□□□ -0.13
SF3B2-202ENST00000524475 CEACAM4O75871 244 aa14.27□□□□□ -0.13
SF3B2-202ENST00000524475 SUPT7LO94864 414 aa14.27□□□□□ -0.13
SF3B2-202ENST00000524475 SEMA3DO95025 777 aa14.27□□□□□ -0.13
SF3B2-202ENST00000524475 PCNAP12004 261 aa14.27□□□□□ -0.13
SF3B2-202ENST00000524475 RNH1P13489 461 aaKnown RBP14.27□□□□□ -0.13
SF3B2-202ENST00000524475 CPA3P15088 417 aa14.27□□□□□ -0.13
SF3B2-202ENST00000524475 PTX3P26022 381 aaPredicted RBP14.27□□□□□ -0.13
SF3B2-202ENST00000524475 EMP2P54851 167 aa14.27□□□□□ -0.13
SF3B2-202ENST00000524475 PKNOX1P55347 436 aa14.27□□□□□ -0.13
SF3B2-202ENST00000524475 POLE2P56282 527 aa14.27□□□□□ -0.13
SF3B2-202ENST00000524475 SOX8P57073 446 aa14.27□□□□□ -0.13
SF3B2-202ENST00000524475 CUL3Q13618 768 aa14.27□□□□□ -0.13
SF3B2-202ENST00000524475 ATP1A4Q13733 1029 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms