RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 SULT1C3Q6IMI6 304 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 ADNP2Q6IQ32 1131 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 H3F3CQ6NXT2 135 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 RPUSD3Q6P087 351 aaKnown RBP17.57■□□□□ 0.4
SPIDR-220ENST00000522900 PAPD4Q6PIY7 484 aaKnown RBP17.57■□□□□ 0.4
SPIDR-220ENST00000522900 TMIGD1Q6UXZ0 262 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 ST6GALNAC3Q8NDV1 305 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 M1APQ8TC57 530 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 EXT2Q93063 718 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 TAAR6Q96RI8 345 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 NPAS2Q99743 824 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.57■□□□□ 0.4
SPIDR-220ENST00000522900 ALG9Q9H6U8 611 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 KCNK13Q9HB14 408 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 CD274Q9NZQ7 290 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 ERRFI1Q9UJM3 462 aaPredicted RBP17.57■□□□□ 0.4
SPIDR-220ENST00000522900 ZNF490Q9ULM2 529 aaPredicted RBP17.57■□□□□ 0.4
SPIDR-220ENST00000522900 TRAV17A0A0B4J275 112 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 URADA6NGE7 173 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 MAN1A2O60476 641 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 STK16O75716 305 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 TBX6O95947 436 aaPredicted RBP17.56■□□□□ 0.4
SPIDR-220ENST00000522900 MAOAP21397 527 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 STX2P32856 288 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 AP2B1P63010 937 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 CKAP4Q07065 602 aaKnown RBP17.56■□□□□ 0.4
SPIDR-220ENST00000522900 RUNX2Q13950 521 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 DOC2AQ14183 400 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 SLMAPQ14BN4 828 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 CDKL4Q5MAI5 379 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 ACER2Q5QJU3 275 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 C8orf74Q6P047 294 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 RAPH1Q70E73 1250 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 VN1R5Q7Z5H4 357 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 ISCA2Q86U28 154 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 CA13Q8N1Q1 262 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 TCAIMQ8N3R3 496 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 SNX31Q8N9S9 440 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 PDPRQ8NCN5 879 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 CCT6BQ92526 530 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 MRRFQ96E11 262 aaKnown RBP17.56■□□□□ 0.4
SPIDR-220ENST00000522900 PTCHD1Q96NR3 888 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 NECTIN3Q9NQS3 549 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 IGSF5Q9NSI5 407 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 GPRC5BQ9NZH0 403 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 RNF112Q9ULX5 631 aa17.56■□□□□ 0.4
SPIDR-220ENST00000522900 HMX2A2RU54 273 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 LRIT2A6NDA9 550 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 CLGNO14967 610 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 CCNT2O60583 730 aaKnown RBP17.55■□□□□ 0.4
SPIDR-220ENST00000522900 PRMT3O60678 531 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 RNH1P13489 461 aaKnown RBP17.55■□□□□ 0.4
SPIDR-220ENST00000522900 TFEBP19484 476 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 CD22P20273 847 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 SLC26A5P58743 744 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 SKP1P63208 163 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 BMPR2Q13873 1038 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 ELOAQ14241 798 aaKnown RBP17.55■□□□□ 0.4
SPIDR-220ENST00000522900 EXT1Q16394 746 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 ZNF324BQ6AW86 544 aaPredicted RBP17.55■□□□□ 0.4
SPIDR-220ENST00000522900 NIPAL1Q6NVV3 410 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 FAM180AQ6UWF9 173 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 CRLF3Q8IUI8 442 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 CYP4X1Q8N118 509 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 BEST3Q8N1M1 668 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 KRT78Q8N1N4 520 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 MS4A6EQ96DS6 147 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 LPAR4Q99677 370 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 CAPS2Q9BXY5 557 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 RNF32Q9H0A6 362 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 NT5DC2Q9H857 520 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 MMP25Q9NPA2 562 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 COPG2Q9UBF2 871 aa17.55■□□□□ 0.4
SPIDR-220ENST00000522900 ESPL1Q14674 2120 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 USP9YO00507 2555 aaPredicted RBP17.54■□□□□ 0.4
SPIDR-220ENST00000522900 OR5H15A6NDH6 313 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 JAK1P23458 1154 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 STXBP1P61764 594 aaKnown RBP17.54■□□□□ 0.4
SPIDR-220ENST00000522900 PDK4Q16654 411 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 XKR6Q5GH73 641 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 MROH9Q5TGP6 573 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 KIF2BQ8N4N8 673 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 STAG3L4Q8TBR4 150 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 GAL3ST3Q96A11 431 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 NXNL1Q96CM4 212 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 WDR34Q96EX3 536 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 ZNF354BQ96LW1 612 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 QRFPRQ96P65 431 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 ATOH8Q96SQ7 321 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 SLX1AQ9BQ83 275 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 CD244Q9BZW8 370 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 CNOT10Q9H9A5 744 aaKnown RBP17.54■□□□□ 0.4
SPIDR-220ENST00000522900 CLK4Q9HAZ1 481 aaKnown RBP17.54■□□□□ 0.4
SPIDR-220ENST00000522900 ANKRD10Q9NXR5 420 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 TEKT2Q9UIF3 430 aa17.54■□□□□ 0.4
SPIDR-220ENST00000522900 IGKV3D-11A0A0A0MRZ8 115 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 A1L4Q6 167 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 WIPF3A6NGB9 483 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 ANKDD1BA6NHY2 528 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 A8MUA0 341 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms