RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ENPEPQ07075 957 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 SLC3A1Q07837 685 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 NCBP1Q09161 790 aaKnown RBP3.77□□□□□ -1.81
SKP1-209ENST00000522552 PMPCAQ10713 525 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 HYAL1Q12794 435 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 PPIL2Q13356 520 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 ENPP2Q13822 863 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 ELAVL3Q14576 367 aaKnown RBP3.77□□□□□ -1.81
SKP1-209ENST00000522552 TXNRD1Q16881 649 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 HKDC1Q2TB90 917 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 ZNF311Q5JNZ3 666 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 MIIPQ5JXC2 388 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 ATL3Q6DD88 541 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 VSTM1Q6UX27 236 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 Q6ZRM9 215 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 CDHR3Q6ZTQ4 885 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 C16orf62Q7Z3J2 963 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 LHFPL4Q7Z7J7 247 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 TPRA1Q86W33 373 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 PAQR7Q86WK9 346 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 ADGRG3Q86Y34 549 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 ZNF683Q8IZ20 524 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 DSELQ8IZU8 1212 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 SYCE1Q8N0S2 351 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 CRYBG2Q8N1P7 616 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 GCSAMQ8N6F7 178 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 TERB1Q8NA31 727 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 THAP8Q8NA92 274 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 SMYD1Q8NB12 490 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 CSNK2A3Q8NEV1 391 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 OR1E3Q8WZA6 343 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 SUSD6Q92537 303 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 FUBP1Q96AE4 644 aaKnown RBP3.77□□□□□ -1.81
SKP1-209ENST00000522552 HAVCR1Q96D42 359 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 ZNF419Q96HQ0 510 aaPredicted RBP3.77□□□□□ -1.81
SKP1-209ENST00000522552 GUCD1Q96NT3 240 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 TSSK2Q96PF2 358 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 OR1F2PQ96R84 312 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 SIGLEC11Q96RL6 698 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 TESK2Q96S53 571 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 PRMT1Q99873 361 aaKnown RBP3.77□□□□□ -1.81
SKP1-209ENST00000522552 MACROD1Q9BQ69 325 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 PRRG4Q9BZD6 226 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 MCOLN1Q9GZU1 580 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 KLC2Q9H0B6 622 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 GSN-AS1Q9NRJ2 163 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 MIS18AQ9NYP9 233 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 PKD2L2Q9NZM6 624 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 TMED7Q9Y3B3 224 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 RNF115Q9Y4L5 304 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 TEX51A0A1B0GUA7 166 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 METTL21EPA6NDL7 271 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 B4DGG1 531 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 FAM90A26D6RGX4 464 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 NPIPA2E9PIF3 369 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 CHUKO15111 745 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 SCO2O43819 266 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 LCMT2O60294 686 aaKnown RBP3.76□□□□□ -1.81
SKP1-209ENST00000522552 B4GALT3O60512 393 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 NDUFB10O96000 172 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 LCKP06239 509 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 ADRB1P08588 477 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 GOT1P17174 413 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 PRKACAP17612 351 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 CD58P19256 250 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 TPSB2P20231 275 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 MX1P20591 662 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 ACO1P21399 889 aaKnown RBP3.76□□□□□ -1.81
SKP1-209ENST00000522552 UGT1A1P22309 533 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 PIGAP37287 484 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 RPS5P46782 204 aaKnown RBP3.76□□□□□ -1.81
SKP1-209ENST00000522552 THOP1P52888 689 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 PLTPP55058 493 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 TMPRSS3P57727 454 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 CD81P60033 236 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 RPS15P62841 145 aaKnown RBP3.76□□□□□ -1.81
SKP1-209ENST00000522552 ZXDBP98169 803 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 RASGEF1BQ0VAM2 473 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 XRCC4Q13426 336 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 CDH18Q13634 790 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 LAMB3Q13751 1172 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 COTL1Q14019 142 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 NONOQ15233 471 aaKnown RBP eCLIP3.76□□□□□ -1.813e-7■■■□□ 16.4
SKP1-209ENST00000522552 RBBP5Q15291 538 aaKnown RBP3.76□□□□□ -1.81
SKP1-209ENST00000522552 P2RY14Q15391 338 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 TPSAB1Q15661 275 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 ZNF124Q15973 351 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 CAMK4Q16566 473 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 RBBP7Q16576 425 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 ZC2HC1CQ53FD0 456 aaPredicted RBP3.76□□□□□ -1.81
SKP1-209ENST00000522552 PCID2Q5JVF3 399 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 FRG2Q64ET8 278 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 NCAPH2Q6IBW4 605 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 DUS1LQ6P1R4 473 aaKnown RBP3.76□□□□□ -1.81
SKP1-209ENST00000522552 IL17RELQ6ZVW7 336 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 CBWD2Q8IUF1 395 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 MB21D2Q8IYB1 491 aaPredicted RBP3.76□□□□□ -1.81
SKP1-209ENST00000522552 LNX2Q8N448 690 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 HORMAD2Q8N7B1 307 aa3.76□□□□□ -1.81
SKP1-209ENST00000522552 GIPC3Q8TF64 312 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms