RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 TRIM40Q6P9F5 258 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 SHQ1Q6PI26 577 aaKnown RBP9.54□□□□□ -0.88
SPARC-202ENST00000520687 ZC3H14Q6PJT7 736 aaKnown RBP9.54□□□□□ -0.88
SPARC-202ENST00000520687 ENPP6Q6UWR7 440 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 FAM83HQ6ZRV2 1179 aaPredicted RBP9.54□□□□□ -0.88
SPARC-202ENST00000520687 USP30Q70CQ3 517 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 CBLL1Q75N03 491 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 ZC3H7AQ8IWR0 971 aaKnown RBP9.54□□□□□ -0.88
SPARC-202ENST00000520687 PHACTR4Q8IZ21 702 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 SYNPOQ8N3V7 929 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 TP53I13Q8NBR0 393 aaPredicted RBP9.54□□□□□ -0.88
SPARC-202ENST00000520687 SMRP1Q8NCR6 262 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 ZFP90Q8TF47 636 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 C16orf78Q8WTQ4 265 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 NUDT8Q8WV74 236 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 SH3KBP1Q96B97 665 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 MSLNLQ96KJ4 702 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 CNDP2Q96KP4 475 aaKnown RBP9.54□□□□□ -0.88
SPARC-202ENST00000520687 GABARAPL1Q9H0R8 117 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 SLC6A13Q9NSD5 602 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 PTTG2Q9NZH5 202 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 CDV3Q9UKY7 258 aaKnown RBP9.54□□□□□ -0.88
SPARC-202ENST00000520687 FZD4Q9ULV1 537 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 SLC17A4Q9Y2C5 497 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 E2F6O75461 281 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 PGM3O95394 542 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 ETHE1O95571 254 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 CPSF4O95639 269 aaKnown RBP9.54□□□□□ -0.88
SPARC-202ENST00000520687 NDUFS1P28331 727 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 PPP2R2BQ00005 443 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 REEP5Q00765 189 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 C2orf80Q0P641 193 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 RGNQ15493 299 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 HKDC1Q2TB90 917 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 NADK2Q4G0N4 442 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 TMEM259Q4ZIN3 620 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 SLC44A4Q53GD3 710 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 KHDRBS2Q5VWX1 349 aaKnown RBP9.54□□□□□ -0.88
SPARC-202ENST00000520687 B3GNT6Q6ZMB0 384 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 ARMCX6Q7L4S7 300 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 ARHGAP22Q7Z5H3 698 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 THAP5Q7Z6K1 395 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 SLC9B2Q86UD5 537 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 SATL1Q86VE3 508 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 HORMAD1Q86X24 394 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 ZDHHC21Q8IVQ6 265 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 ZNF786Q8N393 782 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 DENND6BQ8NEG7 585 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 OR52N2Q8NGI0 321 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 OR4A15Q8NGL6 344 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 OR5AR1Q8NGP9 310 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 FAM110BQ8TC76 370 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 FOXJ1Q92949 421 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 GFM2Q969S9 779 aaKnown RBP9.54□□□□□ -0.88
SPARC-202ENST00000520687 CHFRQ96EP1 664 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 SCARF2Q96GP6 870 aaPredicted RBP9.54□□□□□ -0.88
SPARC-202ENST00000520687 KXD1Q9BQD3 176 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 TUBA1CQ9BQE3 449 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 SLC17A9Q9BYT1 436 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 S1PR5Q9H228 398 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 TMEM38AQ9H6F2 299 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 SH3BP4Q9P0V3 963 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 BLOC1S6Q9UL45 172 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 NCKAP1Q9Y2A7 1128 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 ZNF451Q9Y4E5 1061 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 HSPE1-MOB4S4R3N1 261 aa9.54□□□□□ -0.88
SPARC-202ENST00000520687 WDR87Q6ZQQ6 2873 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 KRT87PA6NCN2 255 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 K7EQS6 105 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 CACNB4O00305 520 aaPredicted RBP9.53□□□□□ -0.88
SPARC-202ENST00000520687 TOR1BO14657 336 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 SLC16A6O15403 523 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 CAPN5O15484 640 aaPredicted RBP9.53□□□□□ -0.88
SPARC-202ENST00000520687 NOBOXO60393 691 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 UGT2B11O75310 529 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 CLEC3AO75596 197 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 FKBP9O95302 570 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 FABP3P05413 133 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 ATP6V1B1P15313 513 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 DNAJA1P31689 397 aaKnown RBP9.53□□□□□ -0.88
SPARC-202ENST00000520687 DCTP40126 519 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 HLCSP50747 726 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 RAB28P51157 221 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 CLCNKAP51800 687 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 MRPS21P82921 87 aaKnown RBP9.53□□□□□ -0.88
SPARC-202ENST00000520687 TSTA3Q13630 321 aaPredicted RBP9.53□□□□□ -0.88
SPARC-202ENST00000520687 HEPACAMQ14CZ8 416 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 IRF4Q15306 451 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 ZNF630Q2M218 657 aaPredicted RBP9.53□□□□□ -0.88
SPARC-202ENST00000520687 OTUD3Q5T2D3 398 aaPredicted RBP9.53□□□□□ -0.88
SPARC-202ENST00000520687 OR2T5Q6IEZ7 315 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 PARM1Q6UWI2 310 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 TMEM26Q6ZUK4 368 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 CCDC80Q76M96 950 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 PTOV1Q86YD1 416 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 SFTPA1Q8IWL2 248 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 C8orf59Q8N0T1 100 aaPredicted RBP9.53□□□□□ -0.88
SPARC-202ENST00000520687 ARL10Q8N8L6 244 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 SETD9Q8NE22 299 aa9.53□□□□□ -0.88
SPARC-202ENST00000520687 GPR156Q8NFN8 814 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms