RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SAP25Q8TEE9 199 aa13.84□□□□□ -0.19
CLN8-204ENST00000519254 ITCHQ96J02 903 aa13.84□□□□□ -0.19
CLN8-204ENST00000519254 ZNF583Q96ND8 569 aa13.84□□□□□ -0.19
CLN8-204ENST00000519254 SLC38A3Q99624 504 aa13.84□□□□□ -0.19
CLN8-204ENST00000519254 PKP2Q99959 881 aa13.84□□□□□ -0.19
CLN8-204ENST00000519254 LRFN3Q9BTN0 628 aa13.84□□□□□ -0.19
CLN8-204ENST00000519254 RMND5AQ9H871 391 aa13.84□□□□□ -0.19
CLN8-204ENST00000519254 SNX13Q9Y5W8 968 aa13.84□□□□□ -0.19
CLN8-204ENST00000519254 RHPN2P1A8MT19 583 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 H7BY64 318 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 SAP18O00422 153 aaKnown RBP13.83□□□□□ -0.19
CLN8-204ENST00000519254 KHNYNO15037 678 aaKnown RBP13.83□□□□□ -0.19
CLN8-204ENST00000519254 PRICKLE3O43900 615 aaPredicted RBP13.83□□□□□ -0.19
CLN8-204ENST00000519254 PCDH7O60245 1069 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 GIMD1P0DJR0 217 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 NCK1P16333 377 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 ENGP17813 658 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 ATP6V1C1P21283 382 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 CDKN2CP42773 168 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 ASMTP46597 345 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 FASLGP48023 281 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 REEP5Q00765 189 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 CYP4F3Q08477 520 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 RBBP5Q15291 538 aaKnown RBP13.83□□□□□ -0.19
CLN8-204ENST00000519254 TRIP10Q15642 601 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 LRRC36Q1X8D7 754 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.83□□□□□ -0.19
CLN8-204ENST00000519254 OGFRL1Q5TC84 451 aaPredicted RBP13.83□□□□□ -0.19
CLN8-204ENST00000519254 OGFOD3Q6PK18 319 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 SLC35F3Q8IY50 421 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 METTL4Q8N3J2 472 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 TMEM102Q8N9M5 508 aaPredicted RBP13.83□□□□□ -0.19
CLN8-204ENST00000519254 ANKRD53Q8N9V6 530 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 OR8J2Q8NGG1 315 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 CDC26Q8NHZ8 85 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.83□□□□□ -0.19
CLN8-204ENST00000519254 CANT1Q8WVQ1 401 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 NAF1Q96HR8 494 aaKnown RBP13.83□□□□□ -0.19
CLN8-204ENST00000519254 PRAP1Q96NZ9 151 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 ZNF184Q99676 751 aaPredicted RBP13.83□□□□□ -0.19
CLN8-204ENST00000519254 AIF1LQ9BQI0 150 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 REXO4Q9GZR2 422 aaKnown RBP13.83□□□□□ -0.19
CLN8-204ENST00000519254 NT5DC2Q9H857 520 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 MRPS30Q9NP92 439 aaKnown RBP13.83□□□□□ -0.19
CLN8-204ENST00000519254 NLGN3Q9NZ94 848 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.83□□□□□ -0.19
CLN8-204ENST00000519254 EXO1Q9UQ84 846 aaKnown RBP13.83□□□□□ -0.19
CLN8-204ENST00000519254 BTBD3Q9Y2F9 522 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 KLHL20Q9Y2M5 609 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 PCDHB3Q9Y5E6 796 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 PCDHGA5Q9Y5G8 931 aa13.83□□□□□ -0.19
CLN8-204ENST00000519254 PCDH15Q96QU1 1955 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 ZNF318Q5VUA4 2279 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 IGKV1-8A0A0C4DH67 115 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 GABRR3A8MPY1 467 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 SCAMP2O15127 329 aaKnown RBP13.83□□□□□ -0.2
CLN8-204ENST00000519254 LAMP1P11279 417 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 COX7A2P14406 83 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 ACADSP16219 412 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 HRH2P25021 359 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 CXCR2P25025 360 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 PTX3P26022 381 aaPredicted RBP13.83□□□□□ -0.2
CLN8-204ENST00000519254 SOX11P35716 441 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 HNRNPFP52597 415 aaKnown RBP13.83□□□□□ -0.2
CLN8-204ENST00000519254 PHEXP78562 749 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 PRDX1Q06830 199 aaKnown RBP13.83□□□□□ -0.2
CLN8-204ENST00000519254 HKDC1Q2TB90 917 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 IRAK1BP1Q5VVH5 260 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 LAIR1Q6GTX8 287 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 IZUMO2Q6UXV1 221 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 KANSL1Q7Z3B3 1105 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 TRIM73Q86UV7 250 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 TMEM126BQ8IUX1 230 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 GOLM1Q8NBJ4 401 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 OR2L3Q8NG85 312 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 FAM110BQ8TC76 370 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 RSC1A1Q92681 617 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 MIEF2Q96C03 454 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 ECSITQ9BQ95 431 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 CPPED1Q9BRF8 314 aaPredicted RBP13.83□□□□□ -0.2
CLN8-204ENST00000519254 TRIM15Q9C019 465 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 KLHL4Q9C0H6 718 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 HRASLS2Q9NWW9 162 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 ACTR10Q9NZ32 417 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 ERVK-11Q9UQG0 969 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 RNF215Q9Y6U7 377 aa13.83□□□□□ -0.2
CLN8-204ENST00000519254 GNG14A0A1W2PPG7 69 aa13.82□□□□□ -0.2
CLN8-204ENST00000519254 TCRBV5S2A0A599 114 aa13.82□□□□□ -0.2
CLN8-204ENST00000519254 FEZF1A0PJY2 475 aa13.82□□□□□ -0.2
CLN8-204ENST00000519254 YKT6O15498 198 aa13.82□□□□□ -0.2
CLN8-204ENST00000519254 PEX1O43933 1283 aa13.82□□□□□ -0.2
CLN8-204ENST00000519254 CAPNS1P04632 268 aa13.82□□□□□ -0.2
CLN8-204ENST00000519254 GSNP06396 782 aa13.82□□□□□ -0.2
CLN8-204ENST00000519254 RPSAP08865 295 aaKnown RBP13.82□□□□□ -0.2
CLN8-204ENST00000519254 ALPPL2P10696 532 aa13.82□□□□□ -0.2
CLN8-204ENST00000519254 PIM1P11309 404 aaPredicted RBP13.82□□□□□ -0.2
CLN8-204ENST00000519254 UGT2B7P16662 529 aa13.82□□□□□ -0.2
CLN8-204ENST00000519254 CMPK1P30085 196 aa13.82□□□□□ -0.2
CLN8-204ENST00000519254 CSNK1G2P78368 415 aa13.82□□□□□ -0.2
CLN8-204ENST00000519254 KIR2DS3Q14952 304 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms