RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 CTNNB1P35222 781 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 BSGP35613 385 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SOX18P35713 384 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 GGT2P36268 569 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TGFBR1P36897 503 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HPCAL1P37235 193 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HALP42357 657 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MAP2K4P45985 399 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ASMTP46597 345 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 BMXP51813 675 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RAD23AP54725 363 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 GAS1P54826 345 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LIM2P55344 173 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RPS3AP61247 264 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NCS1P62166 190 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PHEXP78562 749 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MC1RQ01726 317 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 IRF8Q02556 426 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MVKQ03426 396 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 EMX1Q04741 257 aaPredicted RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SRSF11Q05519 484 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 DUSP2Q05923 314 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ACSM2AQ08AH3 577 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 VAC14Q08AM6 782 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HYAL2Q12891 473 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FADDQ13158 208 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NAE1Q13564 534 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ELOAQ14241 798 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FGL2Q14314 439 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NFE2L1Q14494 772 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CLCA4Q14CN2 919 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 AGERQ15109 404 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 DHCR24Q15392 516 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MLF2Q15773 248 aaPredicted RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TAF12Q16514 161 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HNRNPA1L2Q32P51 320 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PROX2Q3B8N5 592 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 POM121L1PQ3SYA9 428 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TMEM52BQ4KMG9 183 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ARSIQ5FYB1 569 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 XKR6Q5GH73 641 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CRB2Q5IJ48 1285 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TMEM201Q5SNT2 666 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 C10orf62Q5T681 223 aaPredicted RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 C9orf64Q5T6V5 341 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 AGBL4Q5VU57 503 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MLIPQ5VWP3 458 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ACSM2BQ68CK6 577 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PDE12Q6L8Q7 609 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LCTLQ6UWM7 567 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 UNC5DQ6UXZ4 953 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ADAMTSL4Q6UY14 1074 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZNF793Q6ZN11 406 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 Q6ZPB1 254 aaPredicted RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 DCDC5Q6ZRR9 648 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LINC00299Q6ZSB3 139 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 IKBIPQ70UQ0 350 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RTL10Q7L3V2 364 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 UBE3DQ7Z6J8 389 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ADGRD2Q7Z7M1 963 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 GALNT5Q7Z7M9 940 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ATCAYQ86WG3 371 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ADHFE1Q8IWW8 467 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HOMEZQ8IX15 550 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NRSN1Q8IZ57 195 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SLC15A4Q8N697 577 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZNF557Q8N988 423 aaPredicted RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ANKRD53Q8N9V6 530 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LINC01555Q8NAE3 123 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PLA2G15Q8NCC3 412 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 BPIFB6Q8NFQ5 453 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR9Q2Q8NGE9 314 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR4D11Q8NGI4 311 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PSMA8Q8TAA3 256 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SPPL3Q8TCT6 385 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MCOLN3Q8TDD5 553 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HCAR2Q8TDS4 363 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 C16orf78Q8WTQ4 265 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PHF10Q8WUB8 498 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 POF1BQ8WVV4 589 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ASZ1Q8WWH4 475 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TRUB1Q8WWH5 349 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ING5Q8WYH8 240 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 STARD8Q92502 1023 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RPL3LQ92901 407 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 POP5Q969H6 163 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 BORCS5Q969J3 196 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SDCCAG3Q96C92 435 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TIFAQ96CG3 184 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MTFMTQ96DP5 389 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NUS1Q96E22 293 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LRIG1Q96JA1 1093 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PLEKHA8Q96JA3 519 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CCDC138Q96M89 665 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 IL17FQ96PD4 163 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ALPK1Q96QP1 1244 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PANX1Q96RD7 426 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 INSM2Q96T92 566 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms