RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 HLCSP50747 726 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 MLF1P58340 268 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 OLR1P78380 273 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 BBS9Q3SYG4 887 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CATSPEREQ5SY80 951 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 HECTD2Q5U5R9 776 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ARMC10Q8N2F6 343 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 KIF2BQ8N4N8 673 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ADAMTS18Q8TE60 1221 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 UTP15Q8TED0 518 aaKnown RBP13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PDLIM5Q96HC4 596 aaKnown RBP13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TSNARE1Q96NA8 513 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 OSBPL9Q96SU4 736 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SLC6A16Q9GZN6 736 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PPANQ9NQ55 473 aaKnown RBP13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 VWA7Q9Y334 891 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CCDC168Q8NDH2 2452 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CSMD1Q96PZ7 3565 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SYNDIG1LA6NDD5 238 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 E9PLN8 166 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 GUCA1CO95843 209 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SERPINA6P08185 405 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ITGA8P53708 1063 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TERF2Q15554 542 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TEDDM1Q5T9Z0 273 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SBSNQ6UWP8 590 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TMPRSS11BQ86T26 416 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PDIK1LQ8N165 341 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 AGAP11Q8TF27 550 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ANKRD7Q92527 254 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SLCO2A1Q92959 643 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 LRRC39Q96DD0 335 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 VKORC1Q9BQB6 163 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 DEFB126Q9BYW3 111 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SPNS1Q9H2V7 528 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 MMACHCQ9Y4U1 282 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 KCNE2Q9Y6J6 123 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PDZD2O15018 2839 aa13.67□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TFECO14948 347 aaPredicted RBP13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 BANF1O75531 89 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 B3GALT4O96024 378 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ZNF37AP17032 561 aaPredicted RBP13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 MAOAP21397 527 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 GSTM2P28161 218 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ST13P50502 369 aaKnown RBP13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 RAB8AP61006 207 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 STXBP1P61764 594 aaKnown RBP13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CDKL1Q00532 357 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 FRG1Q14331 258 aaKnown RBP13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 MORF4L2Q15014 288 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PPP1R3AQ16821 1122 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 MSS51Q4VC12 460 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ZNF468Q5VIY5 522 aaPredicted RBP13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 NXPE4Q6UWF7 544 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 THOC6Q86W42 341 aaKnown RBP13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 NKAPQ8N5F7 415 aaKnown RBP13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CPSF7Q8N684 471 aaKnown RBP13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ANKRD53Q8N9V6 530 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 NFAM1Q8NET5 270 aaPredicted RBP13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TTLQ8NG68 377 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 GAL3ST3Q96A11 431 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SLC17A6Q9P2U8 582 aa13.66□□□□□ -0.22
SCARNA20.5-201ENST00000516991 A0A088AWK7 358 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 KLRC4-KLRK1H3BQV0 150 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 DNAJB6O75190 326 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SMIM10L1P0DMW3 83 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ZNF10P21506 573 aaPredicted RBP13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 HPDP32754 393 aaPredicted RBP13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 HNMTP50135 292 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CLCN2P51788 898 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 BTG2P78543 158 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 RBBP5Q15291 538 aaKnown RBP13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TOR1AIP1Q5JTV8 583 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 STEAP4Q687X5 459 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SYDE1Q6ZW31 735 aaPredicted RBP13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ADAMTSL2Q86TH1 951 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ZNF227Q86WZ6 799 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 DOLPP1Q86YN1 238 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CHERPQ8IWX8 916 aaKnown RBP13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 B3GNT7Q8NFL0 401 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 C14orf79Q96F83 325 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CFAP36Q96G28 342 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SMIM10Q96HG1 83 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 DMRTA2Q96SC8 542 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SPOCK3Q9BQ16 436 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 RHBGQ9H310 441 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 NECTIN3Q9NQS3 549 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 COQ3Q9NZJ6 369 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ZFATQ9P243 1243 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PPT2Q9UMR5 302 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SNX12Q9UMY4 172 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CHMP2BQ9UQN3 213 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 POLQO75417 2590 aa13.65□□□□□ -0.22
SCARNA20.5-201ENST00000516991 DCHS2Q6V1P9 2916 aa13.64□□□□□ -0.23
SCARNA20.5-201ENST00000516991 C2CD3Q4AC94 2353 aa13.64□□□□□ -0.23
SCARNA20.5-201ENST00000516991 TRBV11-1A0A0K0K1C0 115 aa13.64□□□□□ -0.23
SCARNA20.5-201ENST00000516991 TFEBP19484 476 aa13.64□□□□□ -0.23
SCARNA20.5-201ENST00000516991 POU3F2P20265 443 aaPredicted RBP13.64□□□□□ -0.23
SCARNA20.5-201ENST00000516991 CAPN3P20807 821 aa13.64□□□□□ -0.23
SCARNA20.5-201ENST00000516991 HNF4AP41235 474 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms