RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 NABP1Q96AH0 204 aa2.04□□□□□ -2.08
RNU6-1088P-201ENST00000516850 HDAC11Q96DB2 347 aa2.04□□□□□ -2.08
RNU6-1088P-201ENST00000516850 RUNDC3BQ96NL0 473 aa2.04□□□□□ -2.08
RNU6-1088P-201ENST00000516850 ALKBH3Q96Q83 286 aaPredicted RBP2.04□□□□□ -2.08
RNU6-1088P-201ENST00000516850 TNFRSF13CQ96RJ3 184 aa2.04□□□□□ -2.08
RNU6-1088P-201ENST00000516850 SDHCQ99643 169 aaPredicted RBP2.04□□□□□ -2.08
RNU6-1088P-201ENST00000516850 NACAP1Q9BZK3 213 aa2.04□□□□□ -2.08
RNU6-1088P-201ENST00000516850 DEPPQ9NTK1 212 aa2.04□□□□□ -2.08
RNU6-1088P-201ENST00000516850 THYN1Q9P016 225 aa2.04□□□□□ -2.08
RNU6-1088P-201ENST00000516850 MORF4L1Q9UBU8 362 aa2.04□□□□□ -2.08
RNU6-1088P-201ENST00000516850 AGTPBP1Q9UPW5 1226 aa2.04□□□□□ -2.08
RNU6-1088P-201ENST00000516850 A0A1W2PQ72 361 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 BCLAF3A2AJT9 711 aaKnown RBP2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 CDX4O14627 284 aaPredicted RBP2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 ADAM20O43506 726 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 KIF5CO60282 957 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 TADA2AO75478 443 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 KBTBD11O94819 623 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 CELF2O95319 508 aaKnown RBP2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 PENKP01210 267 aaPredicted RBP2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 PRB2P02812 416 aaPredicted RBP2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 DNTTP04053 509 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 CD59P13987 128 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 RGRP47804 291 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 EIF5P55010 431 aaKnown RBP2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 BTG1P62324 171 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 NAAAQ02083 359 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 ITPK1Q13572 414 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 CYLC2Q14093 348 aaPredicted RBP2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 GRB14Q14449 540 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 POM121L1PQ3SYA9 428 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 GPR139Q6DWJ6 353 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 Q6ZVQ6 151 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 TRMT11Q7Z4G4 463 aaKnown RBP2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 HSCBQ8IWL3 235 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 DND1Q8IYX4 353 aaKnown RBP2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 TEX26Q8N6G2 289 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 ANKRD13CQ8N6S4 541 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 OR1B1Q8NGR6 318 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 SPSB1Q96BD6 273 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 RBM41Q96IZ5 413 aaKnown RBP2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 GDAP1L1Q96MZ0 367 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 LRRC3BQ96PB8 259 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 PCDHB18PQ96TA0 734 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 FN3KQ9H479 309 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 DBF4Q9UBU7 674 aaPredicted RBP2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 NCKAP1Q9Y2A7 1128 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 CPQQ9Y646 472 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 FAM169AQ9Y6X4 670 aa2.03□□□□□ -2.08
RNU6-1088P-201ENST00000516850 SALL1Q9NSC2 1324 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 TRAV18A0A075B6X5 111 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 IGLON5A6NGN9 336 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 TMEM150CB9EJG8 249 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 E5RGE8 158 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 HDAC3O15379 428 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 VENTXO95231 258 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 MT-ND2P03891 347 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 ACHEP22303 614 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 GPX3P22352 226 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 PAX3P23760 479 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 ACAT1P24752 427 aaKnown RBP2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 MC5RP33032 325 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 DUTP33316 252 aaKnown RBP2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 BRCC3P46736 316 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 OR3A3P47888 321 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 MTCP1P56278 107 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 KRTAP10-1P60331 282 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 IL10RBQ08334 325 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 CRY2Q49AN0 593 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 SLC22A6Q4U2R8 563 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 VWA2Q5GFL6 755 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 C15orf52Q6ZUT6 534 aaKnown RBP2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 CROCCP3Q8IVE0 287 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 BEST4Q8NFU0 473 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 ZNF558Q96NG5 402 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 TMOD3Q9NYL9 352 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 IL17CQ9P0M4 197 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 RSPH14Q9UHP6 348 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 SATB2Q9UPW6 733 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 NSG2Q9Y328 171 aa2.02□□□□□ -2.09
RNU6-1088P-201ENST00000516850 E7ENQ6 273 aa2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 H3BMM5 538 aa2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 SPRY1O43609 319 aaPredicted RBP2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 SCO2O43819 266 aa2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 SRPX2O60687 465 aaPredicted RBP2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 STARD3NLO95772 234 aa2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 PIGRP01833 764 aa2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 IGHG1P01857 330 aa2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 PEX3P56589 373 aa2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 PRPF4BQ13523 1007 aaKnown RBP2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 CRMP1Q14194 572 aa2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 FASTKQ14296 549 aaKnown RBP2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 LRRC37A5PQ49AS3 106 aa2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 ZNF542PQ5EBM4 170 aa2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 SPATA1Q5VX52 437 aa2.01□□□□□ -2.09
RNU6-1088P-201ENST00000516850 LIPJQ5W064 366 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms