RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 C9orf172C9J069 976 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 C4orf51C9J302 202 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 PLPP1O14494 284 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 NVLO15381 856 aaKnown RBP19.93■□□□□ 0.78
LSM6-207ENST00000515311 CPNE3O75131 537 aaKnown RBP19.93■□□□□ 0.78
LSM6-207ENST00000515311 VPS4BO75351 444 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 MED26O95402 600 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 ZNF10P21506 573 aaPredicted RBP19.93■□□□□ 0.78
LSM6-207ENST00000515311 TBL3Q12788 808 aaKnown RBP19.93■□□□□ 0.78
LSM6-207ENST00000515311 SPIN4Q56A73 249 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 PRAMEF17Q5VTA0 474 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 Q6ZSR9 355 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 UBE3DQ7Z6J8 389 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 METTL4Q8N3J2 472 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 PROKR1Q8TCW9 393 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 C3orf30Q96M34 536 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 SLC46A1Q96NT5 459 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 C17orf62Q9BQA9 187 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 MRPL1Q9BYD6 325 aaKnown RBP19.93■□□□□ 0.78
LSM6-207ENST00000515311 TRIM55Q9BYV6 548 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 ULBP3Q9BZM4 244 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 ANKHQ9HCJ1 492 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 TXLNGQ9NUQ3 528 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 ADAM21Q9UKJ8 722 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 PCDHGA7Q9Y5G6 932 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 SAP18O00422 153 aaKnown RBP19.92■□□□□ 0.78
LSM6-207ENST00000515311 LSM1O15116 133 aaKnown RBP19.92■□□□□ 0.78
LSM6-207ENST00000515311 GALR3O60755 368 aaPredicted RBP19.92■□□□□ 0.78
LSM6-207ENST00000515311 SH3BGRLO75368 114 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 DXOO77932 396 aaKnown RBP19.92■□□□□ 0.78
LSM6-207ENST00000515311 SCELO95171 688 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 TROVE2P10155 538 aaKnown RBP eCLIP19.92■□□□□ 0.78
LSM6-207ENST00000515311 PLA2G16P53816 162 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 RAB8AP61006 207 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 RTP5Q14D33 572 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 NR6A1Q15406 480 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 SPDYAQ5MJ70 313 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 OR4C11Q6IEV9 310 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 PRMT9Q6P2P2 845 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 TTLL10Q6ZVT0 673 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 MAVSQ7Z434 540 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 CHTF18Q8WVB6 975 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 STON2Q8WXE9 905 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 C11orf24Q96F05 449 aaPredicted RBP19.92■□□□□ 0.78
LSM6-207ENST00000515311 PPP3R2Q96LZ3 170 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 LRFN5Q96NI6 719 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 QRFPRQ96P65 431 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 ZNF717Q9BY31 904 aaPredicted RBP19.92■□□□□ 0.78
LSM6-207ENST00000515311 SLC7A5P2Q9GIP4 190 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 LHX9Q9NQ69 397 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 PRDM7Q9NQW5 492 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 C1orf109Q9NX04 203 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 SIRT5Q9NXA8 310 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 ADAM29Q9UKF5 820 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 KLK13Q9UKR3 277 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 CDC14AQ9UNH5 594 aa19.92■□□□□ 0.78
LSM6-207ENST00000515311 SPTBN2O15020 2390 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 ATP6AP2A0A1C7CYW4 349 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 GMNCA6NCL1 334 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 SRRM3A6NNA2 597 aaPredicted RBP19.91■□□□□ 0.78
LSM6-207ENST00000515311 SDHDO14521 159 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 ATP6AP2O75787 350 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 KLHL18O94889 574 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 NSA2O95478 260 aaKnown RBP19.91■□□□□ 0.78
LSM6-207ENST00000515311 RBMS1P29558 406 aaKnown RBP19.91■□□□□ 0.78
LSM6-207ENST00000515311 RORAP35398 523 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 SNRPNP63162 240 aaKnown RBP19.91■□□□□ 0.78
LSM6-207ENST00000515311 ACSM2AQ08AH3 577 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 AP5B1Q2VPB7 878 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 DEFB134Q4QY38 66 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 ACSM2BQ68CK6 577 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 EPGNQ6UW88 154 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 PAGE2Q7Z2X7 111 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 NUDT13Q86X67 352 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 ZFAND4Q86XD8 727 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 PDSS2Q86YH6 399 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 SLC38A9Q8NBW4 561 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 TUBGCP3Q96CW5 907 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 CLIP3Q96DZ5 547 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 MAELQ96JY0 434 aaKnown RBP19.91■□□□□ 0.78
LSM6-207ENST00000515311 SERINC2Q96SA4 455 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 DPH2Q9BQC3 489 aaPredicted RBP19.91■□□□□ 0.78
LSM6-207ENST00000515311 DDX31Q9H8H2 851 aaKnown RBP19.91■□□□□ 0.78
LSM6-207ENST00000515311 COPS7BQ9H9Q2 264 aaPredicted RBP19.91■□□□□ 0.78
LSM6-207ENST00000515311 CLK4Q9HAZ1 481 aaKnown RBP19.91■□□□□ 0.78
LSM6-207ENST00000515311 LRTM1Q9HBL6 345 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 NPHS2Q9NP85 383 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 DHCR7Q9UBM7 475 aaKnown RBP19.91■□□□□ 0.78
LSM6-207ENST00000515311 NAALAD2Q9Y3Q0 740 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 NEUROG3Q9Y4Z2 214 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 TMEM184BQ9Y519 407 aaPredicted RBP19.91■□□□□ 0.78
LSM6-207ENST00000515311 FER1L5A0AVI2 2057 aa19.91■□□□□ 0.78
LSM6-207ENST00000515311 CDRT15L2A8MXV6 281 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 H0YIG0 161 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 FOXS1O43638 330 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 SHOX2O60902 331 aaPredicted RBP19.9■□□□□ 0.78
LSM6-207ENST00000515311 STK17BO94768 372 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 KIAA0754O94854 1291 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 NTRK1P04629 796 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 PRR35P0CG20 571 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms