RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	CROCC2	H7BZ55	1655 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	USP47	Q96K76	1375 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CDC42BPA	Q5VT25	1732 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ADGRL2	O95490	1459 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PZP	P20742	1482 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ABCC10	Q5T3U5	1492 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CCDC141	Q6ZP82	1450 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SHANK2	Q9UPX8	1470 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	EVPL	Q92817	2033 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	FAM72C	H0Y354	149 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	TLR4	O00206	839 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SLC28A1	O00337	649 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	NOL3	O60936	208 aa	Known RBP	3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DFFB	O76075	338 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PGK2	P07205	417 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	RNF224	P0DH78	156 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	IGHV4-38-2	P0DP08	117 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ETS1	P14921	441 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	LIF	P15018	202 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DGKA	P23743	735 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PDLIM4	P50479	330 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CLCN4	P51793	760 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CNN1	P51911	297 aa	Known RBP	3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	HNRNPF	P52597	415 aa	Known RBP	3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ZNF131	P52739	623 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CDH11	P55287	796 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	HUNK	P57058	714 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	IRX4	P78413	519 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DPYS	Q14117	519 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DCAF10	Q5QP82	559 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	LCE1E	Q5T753	118 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	FAM72A	Q5TYM5	149 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	FAM72D	Q6L9T8	149 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	OLFM4	Q6UX06	510 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	GDPD4	Q6W3E5	623 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SIGLEC15	Q6ZMC9	328 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	C1orf186	Q6ZWK4	172 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	USP43	Q70EL4	1123 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CPEB2	Q7Z5Q1	589 aa	Known RBP	3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	FAM72B	Q86X60	149 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CROCCP3	Q8IVE0	287 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	FBXW8	Q8N3Y1	598 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CCNY	Q8ND76	341 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	TMEM185A	Q8NFB2	350 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	OR13C3	Q8NGS6	347 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	METTL21A	Q8WXB1	218 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PIK3R3	Q92569	461 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	C4orf45	Q96LM5	186 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	GUCD1	Q96NT3	240 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SPAG8	Q99932	426 aa	Predicted RBP	3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	LRRC2	Q9BYS8	371 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	FAM49A	Q9H0Q0	323 aa	Predicted RBP	3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	TRPV6	Q9H1D0	765 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CARD9	Q9H257	536 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	RPF1	Q9H9Y2	349 aa	Known RBP	3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	GPN1	Q9HCN4	374 aa	Predicted RBP	3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PIGV	Q9NUD9	493 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DONSON	Q9NYP3	566 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PTTG2	Q9NZH5	202 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SPAST	Q9UBP0	616 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	C19orf25	Q9UFG5	118 aa	Predicted RBP	3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ERRFI1	Q9UJM3	462 aa	Predicted RBP	3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	GRID1	Q9ULK0	1009 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PLEKHA6	Q9Y2H5	1048 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CLCA3P	Q9Y6N3	262 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	UBE4B	O95155	1302 aa		3.09	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ROCK2	O75116	1388 aa	Known RBP	3.09	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	CCDC144A	A2RUR9	1427 aa		3.09	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	DENND4B	O75064	1496 aa	Predicted RBP	3.09	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	PLEKHH2	Q8IVE3	1493 aa		3.09	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ARHGEF5	Q12774	1597 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	TRBV5-5	A0A0J9YX44	114 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	RGSL1	A5PLK6	1076 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ANTXRL	A6NF34	631 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	SLC15A5	A6NIM6	579 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	TULP2	O00295	520 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ACSL4	O60488	711 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	GLRA3	O75311	464 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	CDK2AP2	O75956	126 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	GUCA1C	O95843	209 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	IGLV2-11	P01706	119 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	HEXB	P07686	556 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	UMOD	P07911	640 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	SERPINF2	P08697	491 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	UGT1A6	P19224	532 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	NR1D1	P20393	614 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	RBMS1	P29558	406 aa	Known RBP	3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	DUT	P33316	252 aa	Known RBP	3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	CDKN1A	P38936	164 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	CAMLG	P49069	296 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	FMO5	P49326	533 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ZNF132	P52740	706 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	DVL1P1	P54792	670 aa	Predicted RBP	3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	SRP54	P61011	504 aa	Known RBP	3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	SST	P61278	116 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	FKBP1B	P68106	108 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	GALK2	Q01415	458 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	MYL7	Q01449	175 aa		3.08	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	HERC3	Q15034	1050 aa		3.08	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms