RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 SNX5Q9Y5X3 404 aa4.43□□□□□ -1.7
CHD1-209ENST00000512844 RTCAO00442 366 aaKnown RBP4.42□□□□□ -1.7
CHD1-209ENST00000512844 MAGEB2O15479 319 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 PI15O43692 258 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 IGHV3-13P01766 116 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 ADORA3P0DMS8 318 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 LBPP18428 481 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 TLX1P31314 330 aaPredicted RBP4.42□□□□□ -1.7
CHD1-209ENST00000512844 SLC1A3P43003 542 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 NDST2P52849 883 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 LMO4P61968 165 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 LY6DQ14210 128 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 GRB14Q14449 540 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 CAVIN1Q6NZI2 390 aaKnown RBP4.42□□□□□ -1.7
CHD1-209ENST00000512844 ZNF343Q6P1L6 599 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 TRAT1Q6PIZ9 186 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 BTNL8Q6UX41 500 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 TRMT11Q7Z4G4 463 aaKnown RBP4.42□□□□□ -1.7
CHD1-209ENST00000512844 CATSPER3Q86XQ3 398 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 ERC1Q8IUD2 1116 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 MSANTD4Q8NCY6 345 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.42□□□□□ -1.7
CHD1-209ENST00000512844 DEPDC1BQ8WUY9 529 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 INTS14Q96SY0 518 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 PCDHB18PQ96TA0 734 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 ATF6BQ99941 703 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 DCTN5Q9BTE1 182 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 MINDY3Q9H8M7 445 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 ZWILCHQ9H900 591 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 KCNK13Q9HB14 408 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 GTSE1Q9NYZ3 720 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 ITGA11Q9UKX5 1188 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 SATB2Q9UPW6 733 aa4.42□□□□□ -1.7
CHD1-209ENST00000512844 CPLX1O14810 134 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 MT-ND2P03891 347 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 TPM2P07951 284 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 PIK3R1P27986 724 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 PSMB4P28070 264 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 HOXC13P31276 330 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 DUTP33316 252 aaKnown RBP4.41□□□□□ -1.7
CHD1-209ENST00000512844 PTGER3P43115 390 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 PGFP49763 221 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 GMPSP49915 693 aaPredicted RBP4.41□□□□□ -1.7
CHD1-209ENST00000512844 DSCR10P59022 87 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 ABRQ12979 859 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 ARMCX4Q5H9R4 360 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 TCEAL6Q6IPX3 200 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 COX8CQ7Z4L0 72 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 MEX3DQ86XN8 651 aaKnown RBP4.41□□□□□ -1.7
CHD1-209ENST00000512844 OR4N5Q8IXE1 308 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 TEX26Q8N6G2 289 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 TEX9Q8N6V9 391 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 OR5M9Q8NGP3 310 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 UBLCP1Q8WVY7 318 aaPredicted RBP4.41□□□□□ -1.7
CHD1-209ENST00000512844 TBC1D31Q96DN5 1066 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 ZMAT2Q96NC0 199 aaKnown RBP4.41□□□□□ -1.7
CHD1-209ENST00000512844 UBAC1Q9BSL1 405 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 THUMPD3Q9BV44 507 aaKnown RBP4.41□□□□□ -1.7
CHD1-209ENST00000512844 TRIM7Q9C029 511 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 PARLQ9H300 379 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 TUBB1Q9H4B7 451 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 HEXA-AS1Q9H8Q6 139 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 DBNDD1Q9H9R9 158 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 LMAN1LQ9HAT1 526 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 ZNF510Q9Y2H8 683 aa4.41□□□□□ -1.7
CHD1-209ENST00000512844 TRIM64A6NGJ6 449 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 TRIM64BA6NI03 449 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 EPM2AB3EWF7 344 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 PDHXO00330 501 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 PSMA7O14818 248 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 INPP4BO15327 924 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 KIF5BP33176 963 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 ATP6V1E1P36543 226 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 PTENP60484 403 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 PTK6Q13882 451 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 LRRC37A5PQ49AS3 106 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 HIGD2BQ4VC39 106 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 ODF2Q5BJF6 829 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 MSANTD1Q6ZTZ1 278 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 Q71RC1 249 aaPredicted RBP4.4□□□□□ -1.71
CHD1-209ENST00000512844 SIX6OS1Q8N1H7 587 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 Q8N377 158 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 OCC1Q8TAD7 63 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 SPPL2AQ8TCT8 520 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 DNASE1L2Q92874 299 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 LURAP1Q96LR2 239 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 ZNF597Q96LX8 424 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 PAPOLGQ9BWT3 736 aaKnown RBP4.4□□□□□ -1.71
CHD1-209ENST00000512844 SP140LQ9H930 580 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 RAB9BQ9NP90 201 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 EPS15L1Q9UBC2 864 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 NOCTQ9UK39 431 aaKnown RBP4.4□□□□□ -1.71
CHD1-209ENST00000512844 CSAG2Q9Y5P2 127 aa4.4□□□□□ -1.71
CHD1-209ENST00000512844 COL5A2P05997 1499 aaPredicted RBP4.4□□□□□ -1.71
CHD1-209ENST00000512844 ARID2Q68CP9 1835 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 C5orf52A6NGY3 159 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 YDJCA8MPS7 323 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 KBTBD13C9JR72 458 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 IFIT3O14879 490 aaKnown RBP4.39□□□□□ -1.71
CHD1-209ENST00000512844 OGTO15294 1046 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms