RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 C7orf61Q8IZ16 206 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 EXD3Q8N9H8 876 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SRFBP1Q8NEF9 429 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SPPL2BQ8TCT7 592 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ADAMTS18Q8TE60 1221 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNRF4Q8WWF5 429 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 CPNE2Q96FN4 548 aaPredicted RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SIPA1Q96FS4 1042 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TSPAN17Q96FV3 270 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 AGAP4Q96P64 663 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TRNT1Q96Q11 434 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SMIM14Q96QK8 99 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 GPR22Q99680 433 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 RIOK2Q9BVS4 552 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 GCOM2Q9BZD3 368 aaPredicted RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 MEAF6Q9HAF1 191 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 FOLH1BQ9HBA9 442 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ABCB10Q9NRK6 738 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ETAA1Q9NY74 926 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 HOXC10Q9NYD6 342 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 PLK2Q9NYY3 685 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 CKLFQ9UBR5 152 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ANGPTL2Q9UKU9 493 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 CARD8Q9Y2G2 431 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 KLHL20Q9Y2M5 609 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 KCNIP3Q9Y2W7 256 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 YTHDF2Q9Y5A9 579 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ARL5AQ9Y689 179 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 FUOMA2VDF0 154 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SH3D21A4FU49 640 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF785A8K8V0 405 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 WASH4PA8MWX3 477 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 A8MXQ7 604 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 C2orf74A8MZ97 194 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM220BPB1ANY3 271 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 H3BSA7 217 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 K7EPI3 171 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 HOXA3O43365 443 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 DCXO43602 365 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MAFO75444 373 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TRPA1O75762 1119 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 POP4O95707 220 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CLPTM1O96005 669 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RAF1P04049 648 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CD2P06729 351 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 GSTM1P09488 218 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RHOXF2BP0C7M4 288 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CYP2A6P11509 494 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ODC1P11926 461 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 HSD17B1P14061 328 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 AKR1A1P14550 325 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 EPCAMP16422 314 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 AMD1P17707 334 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ERCC2P18074 760 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 EFNA1P20827 205 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PCSK1P29120 753 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 HMGCLP35914 325 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC26A3P40879 764 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 GLUD2P49448 558 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CDH15P55291 814 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 POLE2P56282 527 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 GINS1Q14691 196 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CDK10Q15131 360 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CYP2A13Q16696 494 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM83EQ2M2I3 478 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 OXLD1Q5BKU9 147 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 XKR9Q5GH70 373 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PCID2Q5JVF3 399 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TCHHL1Q5QJ38 904 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 DCST1Q5T197 706 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ALKBH2Q6NS38 261 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 LETMD1Q6P1Q0 360 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CEACAM20Q6UY09 585 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 AHSA2Q719I0 299 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ASCL5Q7RTU5 278 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RD3Q7Z3Z2 195 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SNX29P2Q8IUI4 249 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PLD3Q8IV08 490 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MCATQ8IVS2 390 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC44A2Q8IWA5 706 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SIX5Q8N196 739 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 BEST4Q8NFU0 473 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 KLHL6Q8WZ60 621 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 UBE2FQ969M7 185 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MUL1Q969V5 352 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 EXOC2Q96KP1 924 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RHOXF2Q9BQY4 288 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZSCAN5AQ9BUG6 496 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 COLEC11Q9BWP8 271 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 AP1M1Q9BXS5 423 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ROPN1BQ9BZX4 212 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SPRTNQ9H040 489 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ROPN1Q9HAT0 212 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 GPN1Q9HCN4 374 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CYP4F12Q9HCS2 524 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ENY2Q9NPA8 101 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 NGBQ9NPG2 151 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 EHD3Q9NZN3 535 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ICAM5Q9UMF0 924 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms