RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 G3V3Y1 287 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 CELA3AP09093 270 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 INHBBP09529 407 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 ZSCAN5DPP0CG00 497 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 ADARP55265 1226 aaKnown RBP17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 KCTD19Q17RG1 926 aaPredicted RBP17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 DEFB113Q30KQ7 82 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 CLEC9AQ6UXN8 241 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 B3GNT6Q6ZMB0 384 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 WDR53Q7Z5U6 358 aaPredicted RBP17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 CTAGE6Q86UF2 777 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 CNGA4Q8IV77 575 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 TMEM156Q8N614 296 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 PSD4Q8NDX1 1056 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 MYRIPQ8NFW9 859 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 OR2M7Q8NG81 312 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 SMC6Q96SB8 1091 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 LACRTQ9GZZ8 138 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 REXO2Q9Y3B8 237 aaKnown RBP17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 H3BMM5 538 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 CBFA2T2O43439 604 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 LIASO43766 372 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 GLSO94925 669 aaPredicted RBP17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 CDH1P12830 882 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 MEF2AQ02078 507 aaPredicted RBP17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 XKR6Q5GH73 641 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 MEI1Q5TIA1 1274 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 QSOX2Q6ZRP7 698 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 KIAA0408Q6ZU52 694 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 CAMKMTQ7Z624 323 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 MFSD9Q8NBP5 474 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 RELL2Q8NC24 303 aaPredicted RBP17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 NANOS1Q8WY41 292 aaKnown RBP17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 TTTY12Q9BZ98 90 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 CCDC177Q9NQR7 707 aaPredicted RBP17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 SYBUQ9NX95 663 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 TRMT1Q9NXH9 659 aaKnown RBP17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 MXRA5Q9NR99 2828 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 ARID1AO14497 2285 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 KIAA1549Q9HCM3 1950 aa17.68■□□□□ 0.42
HMGCS1-206ENST00000511774 NBEAL1Q6ZS30 2694 aa17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 IGHG3P01860 377 aa17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 TUBB4AP04350 444 aa17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 PTMAP06454 111 aaKnown RBP17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 FREM3P0C091 2139 aa17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 HRH2P25021 359 aa17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 ADSLP30566 484 aaPredicted RBP17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 STIP1P31948 543 aaKnown RBP17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 HERC3Q15034 1050 aa17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 SLC25A35Q3KQZ1 300 aa17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 ZNF549Q6P9A3 640 aa17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 TRILQ7L0X0 811 aa17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 PIWIL4Q7Z3Z4 852 aaKnown RBP17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 ACRBPQ8NEB7 543 aa17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 GOT1L1Q8NHS2 421 aaPredicted RBP17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 SREK1Q8WXA9 508 aaKnown RBP17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 KIFC1Q9BW19 673 aa17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 TIMMDC1Q9NPL8 285 aa17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 FBXW2Q9UKT8 454 aa17.67■□□□□ 0.42
HMGCS1-206ENST00000511774 HIVEP2P31629 2446 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 A0A1B0GVC2 190 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 FIGNL2A6NMB9 653 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 C4orf51C9J302 202 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 TGFBR3LH3BV60 316 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 OR6B1O95007 311 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 LY6G6DO95868 133 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 RAF1P04049 648 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 HEXAP06865 529 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 SLC35G6P0C7Q6 338 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 ZNF888P0CJ79 500 aaPredicted RBP17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 ALOX12P18054 663 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 JAK1P23458 1154 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 MGAT1P26572 445 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 PPP2R1BP30154 601 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 RPL22P35268 128 aaKnown RBP17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 MAGEA5P43359 124 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 GPR143P51810 404 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 PLGLB1Q02325 96 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 FLYWCH1Q4VC44 716 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 MRNIPQ6NTE8 343 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 SEM1Q6ZVN7 128 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 CHSY3Q70JA7 882 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 TMEM251Q8N6I4 163 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 B3GNT7Q8NFL0 401 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 C1orf54Q8WWF1 131 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 SH3GL2Q99962 352 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 REPIN1Q9BWE0 567 aaKnown RBP17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 ATG10Q9H0Y0 220 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 SPNS1Q9H2V7 528 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 ZFATQ9P243 1243 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 ADAMTS6Q9UKP5 1117 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 CLDN16Q9Y5I7 305 aa17.66■□□□□ 0.42
HMGCS1-206ENST00000511774 OR14I1A6ND48 311 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 E5RI56 91 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 BCKDKO14874 412 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 NDUFS4O43181 175 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 CEP104O60308 925 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 MYO1DO94832 1006 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 MPC1LP0DKB6 136 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 ENDOUP21128 410 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms