RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 PRDM4Q9UKN5 801 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 FBXW2Q9UKT8 454 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 TMED7Q9Y3B3 224 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 PYGO1Q9Y3Y4 419 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 TP53BP1Q12888 1972 aaPredicted RBP2.74□□□□□ -1.97
CHD1-207ENST00000511628 A0A087X002 238 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 A0A0U1RQG5 324 aaPredicted RBP2.74□□□□□ -1.97
CHD1-207ENST00000511628 A0A1W2PR80 420 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 SRRM4A7MD48 611 aaKnown RBP2.74□□□□□ -1.97
CHD1-207ENST00000511628 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.74□□□□□ -1.97
CHD1-207ENST00000511628 ZNF732B4DXR9 585 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 E9PQ18 207 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 DDX39AO00148 427 aaKnown RBP2.74□□□□□ -1.97
CHD1-207ENST00000511628 KLF11O14901 512 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 EPHB6O15197 1021 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 SAP30O75446 220 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 CRCPO75575 148 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 YES1P07947 543 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 SLC2A2P11168 524 aaPredicted RBP2.74□□□□□ -1.97
CHD1-207ENST00000511628 GJB2P29033 226 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 SOX3P41225 446 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 SMSP52788 366 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 SLC8A3P57103 927 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 MYL7Q01449 175 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 ARHGAP1Q07960 439 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 ABRQ12979 859 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 NPRL3Q12980 569 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 SRSF9Q13242 221 aaKnown RBP eCLIP2.74□□□□□ -1.97
CHD1-207ENST00000511628 LPAL2Q16609 132 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 C2orf76Q3KRA6 126 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 KCTD11Q693B1 232 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 PTAR1Q7Z6K3 402 aaPredicted RBP2.74□□□□□ -1.97
CHD1-207ENST00000511628 LSMEM2Q8N112 164 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 GPC2Q8N158 579 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 PRSS35Q8N3Z0 413 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 CD99L2Q8TCZ2 262 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 GATAD1Q8WUU5 269 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 ZNF486Q96H40 463 aaPredicted RBP2.74□□□□□ -1.97
CHD1-207ENST00000511628 C18orf12Q96KH6 178 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 C2orf48Q96LS8 159 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 CCDC43Q96MW1 224 aaKnown RBP2.74□□□□□ -1.97
CHD1-207ENST00000511628 SPATA13Q96N96 652 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 LPAR4Q99677 370 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 C17orf62Q9BQA9 187 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 CLEC7AQ9BXN2 247 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 DGCR6LQ9BY27 220 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 TRIM7Q9C029 511 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 TBC1D13Q9NVG8 400 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 TMOD3Q9NYL9 352 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 AKAP7Q9P0M2 348 aaPredicted RBP2.74□□□□□ -1.97
CHD1-207ENST00000511628 TRPC4Q9UBN4 977 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 IL36AQ9UHA7 158 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 PSORS1C1Q9UIG5 152 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 POMT2Q9UKY4 750 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 MOB4Q9Y3A3 225 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 TEX264Q9Y6I9 313 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 COLEC10Q9Y6Z7 277 aa2.74□□□□□ -1.97
CHD1-207ENST00000511628 MAGEB16A2A368 324 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 SCO2O43819 266 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 ECE2O60344 883 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 NXPH2O95156 264 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 MT-ND2P03891 347 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 NUDT17P0C025 328 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 CEBPBP17676 345 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 RPL35AP18077 110 aaKnown RBP2.73□□□□□ -1.97
CHD1-207ENST00000511628 OR1D2P34982 312 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 OR3A2P47893 321 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 XGP55808 180 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 DCDC1P59894 354 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 RPP38P78345 283 aaKnown RBP2.73□□□□□ -1.97
CHD1-207ENST00000511628 CETN1Q12798 172 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 MTF1Q14872 753 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 PTPN14Q15678 1187 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 PKN2Q16513 984 aaKnown RBP2.73□□□□□ -1.97
CHD1-207ENST00000511628 CDC37Q16543 378 aaPredicted RBP2.73□□□□□ -1.97
CHD1-207ENST00000511628 DUSP5Q16690 384 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 IFI44LQ53G44 452 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 WLSQ5T9L3 541 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 LRRC38Q5VT99 294 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 AGAP6Q5VW22 663 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 PSRC1Q6PGN9 363 aaPredicted RBP2.73□□□□□ -1.97
CHD1-207ENST00000511628 PRSS42Q7Z5A4 293 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 LAX1Q8IWV1 398 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 FAM89BQ8N5H3 189 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 ARL10Q8N8L6 244 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 GPRC5AQ8NFJ5 357 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 OR5AP2Q8NGF4 316 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 SMAP2Q8WU79 429 aaPredicted RBP2.73□□□□□ -1.97
CHD1-207ENST00000511628 MOCOSQ96EN8 888 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 C5orf30Q96GV9 206 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 IDI2Q9BXS1 227 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 FGFBP2Q9BYJ0 223 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 PPANQ9NQ55 473 aaKnown RBP2.73□□□□□ -1.97
CHD1-207ENST00000511628 PANK4Q9NVE7 773 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 CYP39A1Q9NYL5 469 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 HACD3Q9P035 362 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 FETUBQ9UGM5 382 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 FBXL4Q9UKA2 621 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 KCNK6Q9Y257 313 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 NCKAP1Q9Y2A7 1128 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms