RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 BOLA3Q53S33 107 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 ZNF449Q6P9G9 518 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 SARM1Q6SZW1 724 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 PARS2Q7L3T8 475 aaKnown RBP4.78□□□□□ -1.64
NEK1-204ENST00000509912 FAM185AQ8N0U4 392 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 RTL3Q8N8U3 475 aaKnown RBP4.78□□□□□ -1.64
NEK1-204ENST00000509912 ABHD11Q8NFV4 315 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 PEX13Q92968 403 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 TBC1D31Q96DN5 1066 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 ZC3HAV1LQ96H79 300 aaKnown RBP4.78□□□□□ -1.64
NEK1-204ENST00000509912 DGAT2Q96PD7 388 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 SMC6Q96SB8 1091 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 CNPY3Q9BT09 278 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 TM2D2Q9BX73 214 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 CAPS2Q9BXY5 557 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 HSD3B7Q9H2F3 369 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 IFNKQ9P0W0 207 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 KIAA1456Q9P272 454 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 SPASTQ9UBP0 616 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 IL36AQ9UHA7 158 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 FZD10Q9ULW2 581 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 LY6G6EA0A0G2JKS1 128 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 TRABD2BA6NFA1 517 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 CAPN9O14815 690 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 PEX1O43933 1283 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 HMBSP08397 361 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 SRCP12931 536 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 CYP11B1P15538 503 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 HOXB9P17482 250 aaPredicted RBP4.78□□□□□ -1.64
NEK1-204ENST00000509912 ADRA1BP35368 520 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 GCLMP48507 274 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 HDAC4P56524 1084 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 RAD51Q06609 339 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 EFEMP1Q12805 493 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 GALNT3Q14435 633 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 CRYMQ14894 314 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 PDK2Q15119 407 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 KIF19Q2TAC6 998 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 IL20RBQ6UXL0 311 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 LEKR1Q6ZMV7 388 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 MON1BQ7L1V2 547 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 TAOK1Q7L7X3 1001 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 TAC4Q86UU9 113 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 CCAR2Q8N163 923 aaKnown RBP4.78□□□□□ -1.64
NEK1-204ENST00000509912 FBXO39Q8N4B4 442 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 LRRC57Q8N9N7 239 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 BOD1Q96IK1 185 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 SSBP3Q9BWW4 388 aaPredicted RBP4.78□□□□□ -1.64
NEK1-204ENST00000509912 C6orf106Q9H6K1 298 aaPredicted RBP4.78□□□□□ -1.64
NEK1-204ENST00000509912 XAB2Q9HCS7 855 aaKnown RBP4.78□□□□□ -1.64
NEK1-204ENST00000509912 EHD3Q9NZN3 535 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 HAO1Q9UJM8 370 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 A4GNTQ9UNA3 340 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 RRP15Q9Y3B9 282 aaKnown RBP4.78□□□□□ -1.64
NEK1-204ENST00000509912 LSM4Q9Y4Z0 139 aaKnown RBP4.78□□□□□ -1.64
NEK1-204ENST00000509912 SESN1Q9Y6P5 492 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 U3KQA8 63 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 SHROOM3Q8TF72 1996 aa4.78□□□□□ -1.64
NEK1-204ENST00000509912 SLC22A23A1A5C7 686 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 RTCAO00442 366 aaKnown RBP4.77□□□□□ -1.65
NEK1-204ENST00000509912 PRAMEF11O60813 436 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 GCATO75600 419 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 LCA5LO95447 670 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 SERPINC1P01008 464 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 CHRNA3P32297 505 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 BUD31P41223 144 aaPredicted RBP4.77□□□□□ -1.65
NEK1-204ENST00000509912 CSNK1EP49674 416 aaKnown RBP4.77□□□□□ -1.65
NEK1-204ENST00000509912 STX17P56962 302 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 C21orf59P57076 290 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 MYL5Q02045 173 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 RPE65Q16518 533 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 DPYSL2Q16555 572 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 ANXA2RQ3ZCQ2 193 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 TCP11X2Q5H9J9 407 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 PAPD7Q5XG87 772 aaKnown RBP4.77□□□□□ -1.65
NEK1-204ENST00000509912 SPOPLQ6IQ16 392 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 TMEM154Q6P9G4 183 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 WDR74Q6RFH5 385 aaPredicted RBP4.77□□□□□ -1.65
NEK1-204ENST00000509912 APTXQ7Z2E3 356 aaKnown RBP4.77□□□□□ -1.65
NEK1-204ENST00000509912 RFX6Q8HWS3 928 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 LMNTD2Q8IXW0 634 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 C12orf29Q8N999 325 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 RBM15BQ8NDT2 890 aaKnown RBP4.77□□□□□ -1.65
NEK1-204ENST00000509912 DDI1Q8WTU0 396 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 COQ10AQ96MF6 247 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 VPS35Q96QK1 796 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 NUDCD1Q96RS6 583 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 RAB9BQ9NP90 201 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.77□□□□□ -1.65
NEK1-204ENST00000509912 BTBD3Q9Y2F9 522 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 MYLKQ15746 1914 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 LILRA5A6NI73 299 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 CGB1A6NKQ9 187 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 MCIDASD6RGH6 385 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 SEC14L5O43304 696 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 MSI1O43347 362 aaKnown RBP4.77□□□□□ -1.65
NEK1-204ENST00000509912 NUDT21O43809 227 aaKnown RBP4.77□□□□□ -1.65
NEK1-204ENST00000509912 TBL1XO60907 577 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 TSPAN15O95858 294 aa4.77□□□□□ -1.65
NEK1-204ENST00000509912 CYP1A2P05177 515 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms