RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 SAT1P21673 171 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 GNALP38405 381 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 ABCG1P45844 678 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 ACADVLP49748 655 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 RAB28P51157 221 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 NAA20P61599 178 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 SLC18A2Q05940 514 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 MGAT2Q10469 447 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 ABRQ12979 859 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 PRKAA1Q13131 559 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 CSHL1Q14406 222 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 PUM1Q14671 1186 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 KIR2DS3Q14952 304 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 NAA25Q14CX7 972 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 CDSNQ15517 529 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 CYP2A13Q16696 494 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 KRT71Q3SY84 523 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 TNFAIP8L3Q5GJ75 292 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 CEP85LQ5SZL2 805 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 UBAP2Q5T6F2 1119 aaKnown RBP5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 ANKS6Q68DC2 871 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 WDR74Q6RFH5 385 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 TMEM207Q6UWW9 146 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 MICALCLQ6ZW33 695 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 EFL1Q7Z2Z2 1120 aaKnown RBP5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 CLEC14AQ86T13 490 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 PIM3Q86V86 326 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 OOSP2Q86WS3 158 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 PLXDC1Q8IUK5 500 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 VRK3Q8IV63 474 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 CEP97Q8IW35 865 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 OR9A1PQ8NGU1 263 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 OR2L8Q8NGY9 312 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 HMGCLL1Q8TB92 370 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 IFI44Q8TCB0 444 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 NAT14Q8WUY8 206 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 EEF1AKMT1Q8WVE0 214 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 LCN9Q8WX39 176 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 GFM2Q969S9 779 aaKnown RBP5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 CAMK1GQ96NX5 476 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 ZIM3Q96PE6 472 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 CD180Q99467 661 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 MRPL57Q9BQC6 102 aaKnown RBP5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 KRTAP17-1Q9BYP8 105 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 TWSG1Q9GZX9 223 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 PCBD2Q9H0N5 130 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 CNOT10Q9H9A5 744 aaKnown RBP5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 DLL3Q9NYJ7 618 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 GALPQ9UBC7 116 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 MID2Q9UJV3 735 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 GRID1Q9ULK0 1009 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 OAZ3Q9UMX2 235 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 PSMD13Q9UNM6 376 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 BTBD3Q9Y2F9 522 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 OARD1Q9Y530 152 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 RNF215Q9Y6U7 377 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 U3KQA8 63 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 SPTBN2O15020 2390 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 IGHV1OR21-1A0A087WYE8 117 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 CPED1A4D0V7 1026 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 OR5K3A6NET4 321 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 ARHGEF33A8MVX0 844 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 C2orf74A8MZ97 194 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 BTN3A1O00481 513 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 NTN3O00634 580 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 PHGDHO43175 533 aaKnown RBP5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 CDC14BO60729 498 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 KERAO60938 352 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 GLRA3O75311 464 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 IPO13O94829 963 aaKnown RBP5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 UBXN7O94888 489 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 CCNDBP1O95273 360 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 CPNE6O95741 557 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 PROS1P07225 676 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 F7P08709 466 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 TPBGLP0DKB5 382 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 ERGP11308 486 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 AMD1P17707 334 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 TFEBP19484 476 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 TAC1P20366 129 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 HRH2P25021 359 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 CRHR1P34998 444 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 GGT5P36269 586 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 SLCO1A2P46721 670 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 CAPZBP47756 277 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 MEOX1P50221 254 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 MAZP56270 477 aaKnown RBP5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 RAC3P60763 192 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 ABATP80404 500 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 ZNF844Q08AG5 666 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 TRA2AQ13595 282 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 BMPR2Q13873 1038 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 GPR18Q14330 331 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 CCDC153Q494R4 210 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 ZMAT1Q5H9K5 638 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 SULT1C3Q6IMI6 304 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 ARMC6Q6NXE6 501 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 ZNF585AQ6P3V2 769 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 GUSBP11Q6P575 273 aa5.28□□□□□ -1.56
HMGB1P44-201ENST00000508597 TMEM71Q6P5X7 295 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms