RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 CCNYL1Q8N7R7 359 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 KCT2Q8NC54 265 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 ARMC2Q8NEN0 867 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 OR52B6Q8NGF0 335 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 OR9A4Q8NGU2 314 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 HUS1BQ8NHY5 278 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 CRELD1Q96HD1 420 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 FAM111AQ96PZ2 611 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 FRG2BQ96QU4 278 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 SERPINI1Q99574 410 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 TBCDQ9BTW9 1192 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 NPLQ9BXD5 320 aaPredicted RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 SLC29A3Q9BZD2 475 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 SPNS1Q9H2V7 528 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 PRORYQ9H606 182 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 VIPAS39Q9H9C1 493 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 EML4Q9HC35 981 aaKnown RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 CPNE5Q9HCH3 593 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 OXSMQ9NWU1 459 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 AHSPQ9NZD4 102 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 C19orf25Q9UFG5 118 aaPredicted RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 IL17BQ9UHF5 180 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 TRPS1Q9UHF7 1281 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 EMCNQ9ULC0 261 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 MRPS33Q9Y291 106 aaKnown RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 NAALAD2Q9Y3Q0 740 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 FER1L5A0AVI2 2057 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 BLACEA4D250 179 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 CDC14CA4D256 554 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 LRRC14BA6NHZ5 514 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 VSTM2BA6NLU5 285 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 G3V2L1 256 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 ERVH48-1M5A8F1 160 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 OR7A17O14581 309 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 FOXS1O43638 330 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 TYROBPO43914 113 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 KLF7O75840 302 aaPredicted RBP8.66□□□□□ -1.02
NUP54-207ENST00000508583 SEMA3DO95025 777 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 SNUPNO95149 360 aaKnown RBP8.66□□□□□ -1.02
NUP54-207ENST00000508583 ESRRBO95718 433 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 CHEK2O96017 543 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 CAPN1P07384 714 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 ZGLP1P0C6A0 271 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 PRKAR1AP10644 381 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 SFTPCP11686 197 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 RNH1P13489 461 aaKnown RBP8.66□□□□□ -1.02
NUP54-207ENST00000508583 HSD3B1P14060 373 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 CD22P20273 847 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 F8A1P23610 371 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 MMP11P24347 488 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 HSD3B2P26439 372 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 HMOX2P30519 316 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 NAGLUP54802 743 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 MTTPP55157 894 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 AP2B1P63010 937 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 TRAF3Q13114 568 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 CUL3Q13618 768 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 DDX39BQ13838 428 aaKnown RBP8.66□□□□□ -1.02
NUP54-207ENST00000508583 COL9A2Q14055 689 aaPredicted RBP8.66□□□□□ -1.02
NUP54-207ENST00000508583 ERV3-1Q14264 604 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 SLC9A5Q14940 896 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 ZRSR2Q15696 482 aaKnown RBP8.66□□□□□ -1.02
NUP54-207ENST00000508583 NKG7Q16617 165 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 COL28A1Q2UY09 1125 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 AP5B1Q2VPB7 878 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 DEFB134Q4QY38 66 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 KHDRBS2Q5VWX1 349 aaKnown RBP8.66□□□□□ -1.02
NUP54-207ENST00000508583 BORAQ6PGQ7 559 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 C19orf48Q6RUI8 117 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 COX15Q7KZN9 410 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 PAGE2Q7Z2X7 111 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 AMER3Q8N944 861 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 OR4F6Q8NGB9 312 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 OR51Q1Q8NH59 317 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 PPP1R14CQ8TAE6 165 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 STT3BQ8TCJ2 826 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 TCP10LQ8TDR4 215 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 UTP15Q8TED0 518 aaKnown RBP8.66□□□□□ -1.02
NUP54-207ENST00000508583 TRPC4APQ8TEL6 797 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 ZNF473Q8WTR7 871 aaKnown RBP8.66□□□□□ -1.02
NUP54-207ENST00000508583 APOBEC4Q8WW27 367 aaKnown RBP8.66□□□□□ -1.02
NUP54-207ENST00000508583 METTL21AQ8WXB1 218 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 RGMAQ96B86 450 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 MS4A6EQ96DS6 147 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 CNDP1Q96KN2 507 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 FER1L6-AS2Q96M78 137 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 NSUN5Q96P11 429 aaKnown RBP8.66□□□□□ -1.02
NUP54-207ENST00000508583 SERINC2Q96SA4 455 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 CRB3Q9BUF7 120 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 MS4A8Q9BY19 250 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 AKIRIN1Q9H9L7 192 aaPredicted RBP8.66□□□□□ -1.02
NUP54-207ENST00000508583 BRF2Q9HAW0 419 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 ZBTB26Q9HCK0 441 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 DMRT3Q9NQL9 472 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 MS4A12Q9NXJ0 267 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 CTSFQ9UBX1 484 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 ZNF490Q9ULM2 529 aaPredicted RBP8.66□□□□□ -1.02
NUP54-207ENST00000508583 MAN2B2Q9Y2E5 1009 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 RNF11Q9Y3C5 154 aa8.66□□□□□ -1.02
NUP54-207ENST00000508583 PKD1L2Q7Z442 2459 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms