RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 DEFA6Q01524 100 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 EMX1Q04741 257 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 PPIGQ13427 754 aaKnown RBP eCLIP7.08□□□□□ -1.283e-7■□□□□ 10.1
UBE2D3-224ENST00000508474 LAPTM4AQ15012 233 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 TBCEQ15813 527 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 BCL7AQ4VC05 210 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 ABCA11PQ4W5N1 156 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 ATXN7L2Q5T6C5 722 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 FAM69AQ5T7M9 428 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 HES5Q5TA89 166 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 TNFAIP8L2Q6P589 184 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 METAP1DQ6UB28 335 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 TMEM135Q86UB9 458 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 HS3ST5Q8IZT8 346 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 SVBPQ8N300 66 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 BEND7Q8N7W2 519 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 YIPF7Q8N8F6 280 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 WDSUB1Q8N9V3 476 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 L3HYPDHQ96EM0 354 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 ELMOD3Q96FG2 381 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 RBCK1Q9BYM8 510 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 BCO2Q9BYV7 579 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 OR51I1Q9H343 314 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 ZBTB20Q9HC78 741 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 NLGN3Q9NZ94 848 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 CD300AQ9UGN4 299 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 MRPS33Q9Y291 106 aaKnown RBP7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 TMEM5Q9Y2B1 443 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 CACNG2Q9Y698 323 aa7.08□□□□□ -1.28
UBE2D3-224ENST00000508474 IGKV6D-41A0A0C4DH26 115 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 C13orf42A0A1B0GVH6 325 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CDK14O94921 469 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 OAZ2O95190 189 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 RENP00797 406 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 TFP02787 698 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 HLA-DQB2P05538 268 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 FAM163BP0C2L3 166 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 SLC35E2BP0CK96 405 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CKMT1AP12532 417 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 BMP4P12644 408 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 TACR2P21452 398 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CPOXP36551 454 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 GRK6P43250 576 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CHRNA4P43681 627 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 RGS19P49795 217 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 S100A10P60903 97 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 MC2RQ01718 297 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 BTN1A1Q13410 526 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 GRB7Q14451 532 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 GINS1Q14691 196 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 UNC50Q53HI1 259 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 RAB41Q5JT25 222 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 IRAK1BP1Q5VVH5 260 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 REEP3Q6NUK4 255 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CXorf40AQ8TE69 158 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 RERGQ96A58 199 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 FCRL3Q96P31 734 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 SSX3Q99909 188 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 TMEM106CQ9BVX2 250 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 ABHD16BQ9H3Z7 469 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 PDZD7Q9H5P4 517 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 MKKSQ9NPJ1 570 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 GTF2IRD1Q9UHL9 959 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 TMEM131LA2VDJ0 1609 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 MRC1P22897 1456 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 LOC100509620A0A075B734 347 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 A0A1W2PQH9 124 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 ELOA3DA6NLF2 546 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 PRAMEF2O60811 474 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 LCKP06239 509 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 SMIM18P0DKX4 95 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 EPHX2P34913 555 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 DCTP40126 519 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 STC1P52823 247 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 EVX2Q03828 476 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 EN1Q05925 392 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 ELOA3BQ3SY89 546 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CLEC12AQ5QGZ9 265 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 SLC27A4Q6P1M0 643 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 SPRED1Q7Z699 444 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 ELOA3Q8NG57 546 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 MFSD8Q8NHS3 518 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 KCTD13Q8WZ19 329 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 NECAB3Q96P71 396 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 KCNA7Q96RP8 456 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 TRIB3Q96RU7 358 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 SORT1Q99523 831 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 C14orf166Q9Y224 244 aaKnown RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 RBM7Q9Y580 266 aaKnown RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 BCL9O00512 1426 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CNTNAP1P78357 1384 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 OR6C75A6NL08 312 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 G3V2L1 256 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 TLR5O60602 858 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 SORBS2O94875 1100 aaKnown RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CFHP08603 1231 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 RHCEP18577 417 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 GNALP38405 381 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 LRP8Q14114 963 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms