RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 TRIM40Q6P9F5 258 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 ISLR2Q6UXK2 745 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 CPEB2Q7Z5Q1 589 aaKnown RBP18.76■□□□□ 0.59
SFXN1-209ENST00000508290 ATCAYQ86WG3 371 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 PARP9Q8IXQ6 854 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 C8orf44Q96CB5 159 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 RHOXF2Q9BQY4 288 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 CLMPQ9H6B4 373 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 ANGPTL3Q9Y5C1 460 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 LRIT2A6NDA9 550 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 CHST10O43529 356 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 UGDHO60701 494 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 WFS1O76024 890 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 PRR35P0CG20 571 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 HNF4AP41235 474 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 SNRPNP63162 240 aaKnown RBP18.75■□□□□ 0.59
SFXN1-209ENST00000508290 EEF1A2Q05639 463 aaKnown RBP18.75■□□□□ 0.59
SFXN1-209ENST00000508290 PCOLCEQ15113 449 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 PCBP2Q15366 365 aaKnown RBP eCLIP18.75■□□□□ 0.59
SFXN1-209ENST00000508290 NSDHLQ15738 373 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 EXT1Q16394 746 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 NADK2Q4G0N4 442 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 EFCAB3Q8N7B9 438 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 RBMXL3Q8N7X1 1067 aaKnown RBP18.75■□□□□ 0.59
SFXN1-209ENST00000508290 OR2L5Q8NG80 312 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 DCAKDQ8WVC6 231 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 ESAMQ96AP7 390 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 MS4A6EQ96DS6 147 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 PEX11GQ96HA9 241 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 GPR78Q96P69 363 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 WDR77Q9BQA1 342 aaPredicted RBP18.75■□□□□ 0.59
SFXN1-209ENST00000508290 CCDC77Q9BR77 488 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 REXO4Q9GZR2 422 aaKnown RBP18.75■□□□□ 0.59
SFXN1-209ENST00000508290 LANCL2Q9NS86 450 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 TEKT2Q9UIF3 430 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 TSC22D4Q9Y3Q8 395 aa18.75■□□□□ 0.59
SFXN1-209ENST00000508290 ZNF860A6NHJ4 632 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 RIPK2O43353 540 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 JRKO75564 520 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 GLRBP48167 497 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 CD97P48960 835 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 RAB8AP61006 207 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 MFAP5Q13361 173 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 PFKFB4Q16877 469 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 TMEM35AQ53FP2 167 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 TECRLQ5HYJ1 363 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 PLAG1Q6DJT9 500 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 FAAH2Q6GMR7 532 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 MED27Q6P2C8 311 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 QSOX2Q6ZRP7 698 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 Q6ZS92 163 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 LAS2Q8IYD9 372 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 IQCKQ8N0W5 287 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 C7orf57Q8NEG2 295 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 ARMC2Q8NEN0 867 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 CCT6BQ92526 530 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 REPS1Q96D71 796 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 IMMP1LQ96LU5 166 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 TRIM4Q9C037 500 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 ILKAPQ9H0C8 392 aaPredicted RBP18.74■□□□□ 0.59
SFXN1-209ENST00000508290 PPCSQ9HAB8 311 aa18.74■□□□□ 0.59
SFXN1-209ENST00000508290 TRIM49D1C9J1S8 452 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 ERI3O43414 337 aaKnown RBP18.73■□□□□ 0.59
SFXN1-209ENST00000508290 EPORP19235 508 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 PHEXP78562 749 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 RHAGQ02094 409 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 Q0VFX4 171 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 ABRAXAS2Q15018 415 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 C10orf62Q5T681 223 aaPredicted RBP18.73■□□□□ 0.59
SFXN1-209ENST00000508290 UBAP2Q5T6F2 1119 aaKnown RBP18.73■□□□□ 0.59
SFXN1-209ENST00000508290 LIPJQ5W064 366 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 B3GNTL1Q67FW5 361 aaPredicted RBP18.73■□□□□ 0.59
SFXN1-209ENST00000508290 GRHL2Q6ISB3 625 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 ADGRD1Q6QNK2 874 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 TIFABQ6ZNK6 161 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 ANKRD37Q7Z713 158 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 OR5T3Q8NGG3 340 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 CPT1CQ8TCG5 803 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 MIB2Q96AX9 1013 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 KCNC2Q96PR1 638 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 SERINC2Q96SA4 455 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 LPAR4Q99677 370 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 MRPL57Q9BQC6 102 aaKnown RBP18.73■□□□□ 0.59
SFXN1-209ENST00000508290 CENPKQ9BS16 269 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 COPS7BQ9H9Q2 264 aaPredicted RBP18.73■□□□□ 0.59
SFXN1-209ENST00000508290 ZNF490Q9ULM2 529 aaPredicted RBP18.73■□□□□ 0.59
SFXN1-209ENST00000508290 MRPS33Q9Y291 106 aaKnown RBP18.73■□□□□ 0.59
SFXN1-209ENST00000508290 MMACHCQ9Y4U1 282 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 PCDHGA11Q9Y5H2 935 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 MED13Q9UHV7 2174 aa18.73■□□□□ 0.59
SFXN1-209ENST00000508290 IQANK1A0A1B0GTG1 560 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 STX16-NPEPL1H3BU86 382 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 CDK2AP1O14519 115 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 STX16O14662 325 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 B3GALT2O43825 422 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 PRMT3O60678 531 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 SMIM24O75264 130 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 UQCRHP07919 91 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 TNFRSF8P28908 595 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 HNRNPH1P31943 449 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms