RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 EPXP11678 715 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 GABRA1P14867 456 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 CD53P19397 219 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 NR0B1P51843 470 aaKnown RBP8.5□□□□□ -1.05
CAST-220ENST00000508117 GPR85P60893 370 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 PPIAP62937 165 aaKnown RBP8.5□□□□□ -1.05
CAST-220ENST00000508117 SKP1P63208 163 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 HERC3Q15034 1050 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 NDUFAF5Q5TEU4 345 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 C11orf63Q6NUN7 778 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 ZNF585AQ6P3V2 769 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 QSOX2Q6ZRP7 698 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 TRILQ7L0X0 811 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 MDGA2Q7Z553 956 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 WDR53Q7Z5U6 358 aaPredicted RBP8.5□□□□□ -1.05
CAST-220ENST00000508117 ADCK2Q7Z695 626 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 PLD3Q8IV08 490 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 LRRC56Q8IYG6 542 aaPredicted RBP8.5□□□□□ -1.05
CAST-220ENST00000508117 LRRC75A-AS1Q8N1F1 130 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 AFAP1L2Q8N4X5 818 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 APCDD1LQ8NCL9 501 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 PSD4Q8NDX1 1056 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 OR52K1Q8NGK4 314 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 ZNF480Q8WV37 535 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 KRT35Q92764 455 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 RNASE6Q93091 150 aaKnown RBP8.5□□□□□ -1.05
CAST-220ENST00000508117 PEX11GQ96HA9 241 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 CCDC42Q96M95 316 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 ZNF778Q96MU6 729 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 PRAP1Q96NZ9 151 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 PKP4Q99569 1192 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 SH3GL2Q99962 352 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 CLK4Q9HAZ1 481 aaKnown RBP8.5□□□□□ -1.05
CAST-220ENST00000508117 DEPPQ9NTK1 212 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 CATSPERZQ9NTU4 200 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 SPTLC3Q9NUV7 552 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 ZNHIT6Q9NWK9 470 aaKnown RBP8.5□□□□□ -1.05
CAST-220ENST00000508117 PPIEQ9UNP9 301 aaKnown RBP8.5□□□□□ -1.05
CAST-220ENST00000508117 R3HDM2Q9Y2K5 976 aaKnown RBP8.5□□□□□ -1.05
CAST-220ENST00000508117 DUSP10Q9Y6W6 482 aa8.5□□□□□ -1.05
CAST-220ENST00000508117 IGKV3D-11A0A0A0MRZ8 115 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 TCRBV16S1A1N1A0A5B0 115 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 HSPB2A8KAH6 182 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 H3BMM5 538 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 ITGA10O75578 1167 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 CDC123O75794 336 aaPredicted RBP8.49□□□□□ -1.05
CAST-220ENST00000508117 PCSK6P29122 969 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 UQCRC1P31930 480 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 CTNNA1P35221 906 aaKnown RBP8.49□□□□□ -1.05
CAST-220ENST00000508117 ASCL1P50553 236 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 CLCN2P51788 898 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 ADARP55265 1226 aaKnown RBP8.49□□□□□ -1.05
CAST-220ENST00000508117 PPP2R2BQ00005 443 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 SNTB1Q13884 538 aaKnown RBP8.49□□□□□ -1.05
CAST-220ENST00000508117 TRIM14Q14142 442 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 PCBP2Q15366 365 aaKnown RBP eCLIP8.49□□□□□ -1.05
CAST-220ENST00000508117 TERF2Q15554 542 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 HSPB2Q16082 182 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 HYAL4Q2M3T9 481 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 CTSL3PQ5NE16 218 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 C1orf185Q5T7R7 199 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 PRSS57Q6UWY2 283 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 CAPN12Q6ZSI9 719 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 LDB1Q86U70 411 aaPredicted RBP8.49□□□□□ -1.05
CAST-220ENST00000508117 CXorf67Q86X51 503 aaPredicted RBP8.49□□□□□ -1.05
CAST-220ENST00000508117 SLC13A5Q86YT5 568 aaPredicted RBP8.49□□□□□ -1.05
CAST-220ENST00000508117 FAM109AQ8N4B1 249 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 FAM71DQ8N9W8 422 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 KCT2Q8NC54 265 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 OR2M7Q8NG81 312 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 OR5M9Q8NGP3 310 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 SARAFQ96BY9 339 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 BIRC8Q96P09 236 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 CHP1Q99653 195 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 FAM118BQ9BPY3 351 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 TTTY12Q9BZ98 90 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 GOLPH3Q9H4A6 298 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 NHEJ1Q9H9Q4 299 aaPredicted RBP8.49□□□□□ -1.05
CAST-220ENST00000508117 MARCH4Q9P2E8 410 aaPredicted RBP8.49□□□□□ -1.05
CAST-220ENST00000508117 YARS2Q9Y2Z4 477 aaKnown RBP8.49□□□□□ -1.05
CAST-220ENST00000508117 NAALAD2Q9Y3Q0 740 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 TCAF1Q9Y4C2 921 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 PCDHA3Q9Y5H8 950 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 EML6Q6ZMW3 1958 aa8.49□□□□□ -1.05
CAST-220ENST00000508117 PINLYPA6NC86 204 aa8.48□□□□□ -1.05
CAST-220ENST00000508117 TUBAL3A6NHL2 446 aa8.48□□□□□ -1.05
CAST-220ENST00000508117 DVL2O14641 736 aa8.48□□□□□ -1.05
CAST-220ENST00000508117 HCN1O60741 890 aa8.48□□□□□ -1.05
CAST-220ENST00000508117 GALR3O60755 368 aaPredicted RBP8.48□□□□□ -1.05
CAST-220ENST00000508117 NDUFS3O75489 264 aa8.48□□□□□ -1.05
CAST-220ENST00000508117 ESR1P03372 595 aa8.48□□□□□ -1.05
CAST-220ENST00000508117 SLC35G6P0C7Q6 338 aa8.48□□□□□ -1.05
CAST-220ENST00000508117 SKIV2L2P42285 1042 aaKnown RBP8.48□□□□□ -1.05
CAST-220ENST00000508117 SSR4P51571 173 aa8.48□□□□□ -1.05
CAST-220ENST00000508117 EIF3BP55884 814 aaKnown RBP8.48□□□□□ -1.05
CAST-220ENST00000508117 SORDQ00796 357 aa8.48□□□□□ -1.05
CAST-220ENST00000508117 PLGLB1Q02325 96 aa8.48□□□□□ -1.05
CAST-220ENST00000508117 TSTA3Q13630 321 aaPredicted RBP8.48□□□□□ -1.05
CAST-220ENST00000508117 RPS6KA1Q15418 735 aa8.48□□□□□ -1.05
CAST-220ENST00000508117 KLHL38Q2WGJ6 581 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms