RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 PRSS38A1L453 326 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 LRRC72A6NJI9 287 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 PLPP1O14494 284 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 NOBOXO60393 691 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 B3GALT4O96024 378 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 UQCRC2P22695 453 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 AHRP35869 848 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 CSNK1G2P78368 415 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 SF1Q15637 639 aaKnown RBP16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 ZNF630Q2M218 657 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 ZNF385BQ569K4 471 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 OTUD3Q5T2D3 398 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 GCNT6Q5T4J0 391 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 OR2T5Q6IEZ7 315 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 TDHQ8IZJ6 230 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 OR2T29Q8NH02 315 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 ADAMTS16Q8TE57 1224 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 OR5P2Q8WZ92 322 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 SLC35A5Q9BS91 424 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 ACAT2Q9BWD1 397 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 YIPF3Q9GZM5 350 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 DMTF1Q9Y222 760 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 PCDHGA2Q9Y5H1 932 aa16.52■□□□□ 0.24
TRAPPC11-204ENST00000505676 COL4A2P08572 1712 aa16.52■□□□□ 0.23
TRAPPC11-204ENST00000505676 PDZK1P1A8MUH7 402 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 ZNF682O95780 498 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 IL3P08700 152 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 COL9A1P20849 921 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 SHMT2P34897 504 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 BSGP35613 385 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 DCTP40126 519 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 TSFMP43897 325 aaKnown RBP16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 YPEL5P62699 121 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 HBA1P69905 142 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 GAB1Q13480 694 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 CCDC80Q76M96 950 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 LINC01555Q8NAE3 123 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 SRFBP1Q8NEF9 429 aaKnown RBP16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 NCSTNQ92542 709 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 KLK6Q92876 244 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 DDX18Q9NVP1 670 aaKnown RBP16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 ZSCAN32Q9NX65 697 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 PCOLCE2Q9UKZ9 415 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 KCNK6Q9Y257 313 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 CFAP20Q9Y6A4 193 aaKnown RBP16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 COMMD3-BMI1R4GMX3 469 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 NDUFS4O43181 175 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 GUCY1B2O75343 617 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 SH3BGRLO75368 114 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 PGM3O95394 542 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 FUCA1P04066 466 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 DRD2P14416 443 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 CDH2P19022 906 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 LTBRP36941 435 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 MLC1Q15049 377 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 ANKRD53Q8N9V6 530 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 OR2A1Q8NGT9 310 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 WDR92Q96MX6 357 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 DDX31Q9H8H2 851 aaKnown RBP16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 MRPS30Q9NP92 439 aaKnown RBP16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 CUEDC1Q9NWM3 386 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 EHD3Q9NZN3 535 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 OR6C2Q9NZP2 312 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 CD207Q9UJ71 328 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 PCDHGB5Q9Y5G0 923 aa16.51■□□□□ 0.23
TRAPPC11-204ENST00000505676 PRR23AA6NEV1 266 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 H7BY64 318 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 SUV39H1O43463 412 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 KLHL18O94889 574 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 SNAP29O95721 258 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 C6orf47O95873 294 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 FPR1P21462 350 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 HNRNPA2B1P22626 353 aaKnown RBP16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 CMPK1P30085 196 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 DNAJA1P31689 397 aaKnown RBP16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 TTKP33981 857 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 RPE65Q16518 533 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 TBPL2Q6SJ96 375 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 TMEM26Q6ZUK4 368 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 ZC3H7AQ8IWR0 971 aaKnown RBP16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 ZNF786Q8N393 782 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 OR52E1Q8NGJ3 308 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 LZICQ8WZA0 190 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 SLC22A18Q96BI1 424 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 MRGPRX1Q96LB2 322 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 PRAP1Q96NZ9 151 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 ZNF717Q9BY31 904 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 NLNQ9BYT8 704 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 THUMPD1Q9NXG2 353 aaKnown RBP16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 TAS2R7Q9NYW3 318 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 ERVK-11Q9UQG0 969 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 CHD7Q9P2D1 2997 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 SAP18O00422 153 aaKnown RBP16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 OR1F1O43749 312 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 AHCYL1O43865 530 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 TNFRSF21O75509 655 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 FESP07332 822 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 ALDH3B2P48448 385 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 ITGA1P56199 1179 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms