RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 PSMB4P28070 264 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 FOXN2P32314 431 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 OPRM1P35372 400 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 TRPC1P48995 793 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 NR2C2P49116 596 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 BTG2P78543 158 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 PRDX1Q06830 199 aaKnown RBP11.55□□□□□ -0.56
LSM6-204ENST00000504181 SPARCL1Q14515 664 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 TMED2Q15363 201 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 XKR6Q5GH73 641 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 BZW1Q7L1Q6 419 aaKnown RBP11.55□□□□□ -0.56
LSM6-204ENST00000504181 GPALPP1Q8IXQ4 340 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 KCT2Q8NC54 265 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 B3GNT7Q8NFL0 401 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 OR6P1Q8NGX9 317 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 GSDMBQ8TAX9 411 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 SMPDL3AQ92484 453 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 TBL1YQ9BQ87 522 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 SGPP1Q9BX95 441 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 TSSK1BQ9BXA7 367 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 ZNF701Q9NV72 531 aaPredicted RBP11.55□□□□□ -0.56
LSM6-204ENST00000504181 AIPL1Q9NZN9 384 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 LIMA1Q9UHB6 759 aaKnown RBP11.55□□□□□ -0.56
LSM6-204ENST00000504181 TRHDEQ9UKU6 1024 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 NOTCH1P46531 2555 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 AHRRA9YTQ3 701 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 CCNDBP1O95273 360 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 MAOAP21397 527 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 IL10P22301 178 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 JAK1P23458 1154 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 CFPP27918 469 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 SOX18P35713 384 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 CCNFP41002 786 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 OLR1P78380 273 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 PDLIM3Q53GG5 364 aaPredicted RBP11.54□□□□□ -0.56
LSM6-204ENST00000504181 C6orf52Q5T4I8 152 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 VSIG1Q86XK7 387 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 LIX1Q8N485 282 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 FBXO15Q8NCQ5 510 aaPredicted RBP11.54□□□□□ -0.56
LSM6-204ENST00000504181 PPFIBP2Q8ND30 876 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 NEIL3Q8TAT5 605 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 STYXQ8WUJ0 223 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 IGFBPL1Q8WX77 278 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 TBC1D20Q96BZ9 403 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 HAUS1Q96CS2 278 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 TRIB1Q96RU8 372 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 CCDC77Q9BR77 488 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 AARSD1Q9BTE6 412 aaKnown RBP11.54□□□□□ -0.56
LSM6-204ENST00000504181 CARD6Q9BX69 1037 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 CXorf56Q9H5V9 222 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 C10orf88Q9H8K7 445 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 SACM1LQ9NTJ5 587 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 KLHL28Q9NXS3 571 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 CTTNBP2NLQ9P2B4 639 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 MRFAP1Q9Y605 127 aa11.54□□□□□ -0.56
LSM6-204ENST00000504181 C15orf38-AP3S2A0A0A6YYH1 394 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 TCRBV16S1A1N1A0A5B0 115 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 CCDC162PA2VCL2 907 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 KIF5CO60282 957 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 MYO1DO94832 1006 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 RFPL3SP0C7P2 107 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 CCL3P10147 92 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 ERGP11308 486 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 RELAQ04206 551 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 POU6F1Q14863 301 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 ODF2Q5BJF6 829 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 MEI1Q5TIA1 1274 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 NSUN5P2Q63ZY6 315 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 ITPRIPL1Q6GPH6 555 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 MFSD7Q6UXD7 560 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 RTL4Q6ZR62 310 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 QSOX2Q6ZRP7 698 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 CCDC50Q8IVM0 306 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 MAGEC3Q8TD91 643 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 NCLNQ969V3 563 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 SCYL1Q96KG9 808 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 FOPNLQ96NB1 174 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 QKIQ96PU8 341 aaKnown RBP eCLIP11.53□□□□□ -0.56
LSM6-204ENST00000504181 RASL10BQ96S79 203 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 ADAM19Q9H013 955 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 ZNF703Q9H7S9 590 aaPredicted RBP11.53□□□□□ -0.56
LSM6-204ENST00000504181 NECTIN3Q9NQS3 549 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 SAMD15Q9P1V8 674 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 AAR2Q9Y312 384 aaKnown RBP11.53□□□□□ -0.56
LSM6-204ENST00000504181 ATG4BQ9Y4P1 393 aa11.53□□□□□ -0.56
LSM6-204ENST00000504181 EXPH5Q8NEV8 1989 aa11.52□□□□□ -0.56
LSM6-204ENST00000504181 H7BY64 318 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 WWP2O00308 870 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 CST8O60676 142 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 IL18BPO95998 194 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 P04436 131 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 TMIGD3P0DMS9 266 aaPredicted RBP11.52□□□□□ -0.57
LSM6-204ENST00000504181 MEF2AQ02078 507 aaPredicted RBP11.52□□□□□ -0.57
LSM6-204ENST00000504181 FOXF2Q12947 444 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 PRPSAP1Q14558 356 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.52□□□□□ -0.57
LSM6-204ENST00000504181 UBAP2Q5T6F2 1119 aaKnown RBP11.52□□□□□ -0.57
LSM6-204ENST00000504181 RNF187Q5TA31 235 aaPredicted RBP11.52□□□□□ -0.57
LSM6-204ENST00000504181 OTOAQ7RTW8 1153 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 SLC26A11Q86WA9 606 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms