RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 SLC1A2P43004 574 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 VPS41P49754 854 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 CCR8P51685 355 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 RGS1Q08116 209 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 TPSAB1Q15661 275 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 EMC4Q5J8M3 183 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 PAOXQ6QHF9 649 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 LCTLQ6UWM7 567 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 ACAD11Q709F0 780 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 ABHD13Q7L211 337 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 MDGA2Q7Z553 956 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 PALM2Q8IXS6 379 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 AFAP1L2Q8N4X5 818 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 ZFP62Q8NB50 900 aaPredicted RBP12.15□□□□□ -0.46
TRIO-205ENST00000503399 ARMC2Q8NEN0 867 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 OR5M9Q8NGP3 310 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 FOXC2Q99958 501 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 SLC6A16Q9GZN6 736 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 SLC24A3Q9HC58 644 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 TIMMDC1Q9NPL8 285 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 NECTIN3Q9NQS3 549 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 KCMF1Q9P0J7 381 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 TRMT6Q9UJA5 497 aaKnown RBP12.15□□□□□ -0.46
TRIO-205ENST00000503399 ERVK-11Q9UQG0 969 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 PDE10AQ9Y233 779 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 ANKHD1Q8IWZ3 2542 aaKnown RBP12.15□□□□□ -0.46
TRIO-205ENST00000503399 AKAP6Q13023 2319 aa12.15□□□□□ -0.46
TRIO-205ENST00000503399 PHF3Q92576 2039 aaKnown RBP12.15□□□□□ -0.47
TRIO-205ENST00000503399 ZNF407Q9C0G0 2248 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 ZNF469Q96JG9 3925 aaPredicted RBP12.14□□□□□ -0.47
TRIO-205ENST00000503399 TCRBV16S1A1N1A0A5B0 115 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 FAM221AA4D161 298 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 PABPN1LA6NDY0 278 aaKnown RBP12.14□□□□□ -0.47
TRIO-205ENST00000503399 ACOT7O00154 380 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 SLC16A5O15375 505 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 KLK8O60259 260 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 MYO1DO94832 1006 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 TUBB4AP04350 444 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 CCND1P24385 295 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 KCNJ1P48048 391 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 SSR4P51571 173 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 CLCN2P51788 898 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 RAB8AP61006 207 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 PPIAP62937 165 aaKnown RBP12.14□□□□□ -0.47
TRIO-205ENST00000503399 SARNPP82979 210 aaKnown RBP12.14□□□□□ -0.47
TRIO-205ENST00000503399 CDK16Q00536 496 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 PWP1Q13610 501 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 SIX1Q15475 284 aaPredicted RBP12.14□□□□□ -0.47
TRIO-205ENST00000503399 TRIP13Q15645 432 aaPredicted RBP12.14□□□□□ -0.47
TRIO-205ENST00000503399 CCNG2Q16589 344 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 NIPAL1Q6NVV3 410 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 ZNF585AQ6P3V2 769 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 ZZZ3Q8IYH5 903 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 TBC1D19Q8N5T2 526 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 NFAM1Q8NET5 270 aaPredicted RBP12.14□□□□□ -0.47
TRIO-205ENST00000503399 SREK1Q8WXA9 508 aaKnown RBP12.14□□□□□ -0.47
TRIO-205ENST00000503399 PYCR2Q96C36 320 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 PWWP2AQ96N64 755 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 BAG1Q99933 345 aaPredicted RBP12.14□□□□□ -0.47
TRIO-205ENST00000503399 HAUS8Q9BT25 410 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 POLDIP3Q9BY77 421 aaKnown RBP12.14□□□□□ -0.47
TRIO-205ENST00000503399 CXXC4Q9H2H0 198 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 GSX1Q9H4S2 264 aaPredicted RBP12.14□□□□□ -0.47
TRIO-205ENST00000503399 PRDM9Q9NQV7 894 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 PLSCR2Q9NRY7 297 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 PNPLA3Q9NST1 481 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 ABCA4P78363 2273 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 DNAJC13O75165 2243 aa12.14□□□□□ -0.47
TRIO-205ENST00000503399 TRBC2A0A5B9 178 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 A8MVJ9 347 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 C8GP07360 202 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 RNH1P13489 461 aaKnown RBP12.13□□□□□ -0.47
TRIO-205ENST00000503399 NPPBP16860 134 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 RGS4P49798 205 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 ZNF75DP51815 510 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 FOXD4Q12950 439 aaPredicted RBP12.13□□□□□ -0.47
TRIO-205ENST00000503399 SNTB1Q13884 538 aaKnown RBP12.13□□□□□ -0.47
TRIO-205ENST00000503399 SKOR2Q2VWA4 1001 aaPredicted RBP12.13□□□□□ -0.47
TRIO-205ENST00000503399 GXYLT1Q4G148 440 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 LRRC8EQ6NSJ5 796 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 C16orf47Q6ZP98 133 aaPredicted RBP12.13□□□□□ -0.47
TRIO-205ENST00000503399 MYO1HQ8N1T3 1032 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 APCDD1LQ8NCL9 501 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 PSD4Q8NDX1 1056 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 B3GNT7Q8NFL0 401 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 UTP15Q8TED0 518 aaKnown RBP12.13□□□□□ -0.47
TRIO-205ENST00000503399 EEF1AKMT1Q8WVE0 214 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 NINJ1Q92982 152 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 PDLIM2Q96JY6 352 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 SMC6Q96SB8 1091 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 NDNQ99608 321 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 CCDC77Q9BR77 488 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 GPATCH1Q9BRR8 931 aaKnown RBP12.13□□□□□ -0.47
TRIO-205ENST00000503399 SGPP1Q9BX95 441 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 LIME1Q9H400 295 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 PARVBQ9HBI1 364 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 PNO1Q9NRX1 252 aaKnown RBP12.13□□□□□ -0.47
TRIO-205ENST00000503399 DEPPQ9NTK1 212 aa12.13□□□□□ -0.47
TRIO-205ENST00000503399 C20orf96Q9NUD7 363 aaPredicted RBP12.13□□□□□ -0.47
TRIO-205ENST00000503399 HPF1Q9NWY4 346 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms