RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 TCN1P20061 433 aaPredicted RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 TCN2P20062 427 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 COL8A1P27658 744 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 EEF1DP29692 281 aaKnown RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 OR1E1P30953 314 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 RRM2P31350 389 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 CDKN2BP42772 138 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 OR3A3P47888 321 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 HCAR3P49019 387 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 ABCE1P61221 599 aaKnown RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 OCA2Q04671 838 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 SNTA1Q13424 505 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 MAMLD1Q13495 774 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 TRIM25Q14258 630 aaKnown RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 TAF5Q15542 800 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 CYBRD1Q53TN4 286 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 YIF1BQ5BJH7 314 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 CARD16Q5EG05 197 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 ZC3H12BQ5HYM0 836 aaKnown RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 DCAF12Q5T6F0 453 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 NDUFAF5Q5TEU4 345 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 CYP20A1Q6UW02 462 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 TIFABQ6ZNK6 161 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 MON1BQ7L1V2 547 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 PARS2Q7L3T8 475 aaKnown RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 BEND5Q7L4P6 421 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 KCTD20Q7Z5Y7 419 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 SPRED1Q7Z699 444 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 GALNT7Q86SF2 657 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 C10orf107Q8IVU9 208 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 RCOR2Q8IZ40 523 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 ADGRG5Q8IZF4 528 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 OFCC1Q8IZS5 231 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 PDIK1LQ8N165 341 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 CADM2Q8N3J6 435 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 ZCCHC7Q8N3Z6 543 aaKnown RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 FAM109AQ8N4B1 249 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 PCDH20Q8N6Y1 951 aaKnown RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 ZNF781Q8N8C0 355 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 NKAIN3Q8N8D7 197 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 IL17RDQ8NFM7 739 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 IPCEF1Q8WWN9 437 aaPredicted RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 CPA5Q8WXQ8 436 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 TFAP2BQ92481 460 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 SLC45A3Q96JT2 553 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 TMEM246Q9BRR3 403 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 FUNDC2Q9BWH2 189 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 YTHDF1Q9BYJ9 559 aaKnown RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 SEMA6CQ9H3T2 930 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 FAM96AQ9H5X1 160 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.34□□□□□ -1.72
MATR3-202ENST00000502422 IFT80Q9P2H3 777 aaPredicted RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 SAE1Q9UBE0 346 aaPredicted RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 HECAQ9UBI9 543 aaPredicted RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 GDF2Q9UK05 429 aaPredicted RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 PNMA8BQ9ULN7 279 aaPredicted RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 POLHQ9Y253 713 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 TP53TG5Q9Y2B4 290 aa4.34□□□□□ -1.72
MATR3-202ENST00000502422 SPENQ96T58 3664 aaKnown RBP4.34□□□□□ -1.72
MATR3-202ENST00000502422 ITPR2Q14571 2701 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 CHD5Q8TDI0 1954 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 CELSR2Q9HCU4 2923 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 A0A0D9SEW6 157 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 A0A1B0GTL3 188 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 SAC3D1A6NKF1 404 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 C16orf96A6NNT2 1141 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 RHPN2P1A8MT19 583 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 EVPLLA8MZ36 301 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 B4DGG1 531 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 SHISA8B8ZZ34 492 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 PMM2O15305 246 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 PHGDHO43175 533 aaKnown RBP4.33□□□□□ -1.72
MATR3-202ENST00000502422 NUDT21O43809 227 aaKnown RBP4.33□□□□□ -1.72
MATR3-202ENST00000502422 CCNKO75909 580 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 KRT1P04264 644 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 HTR1AP08908 422 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 CELA3AP09093 270 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 KRT5P13647 590 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 PRKACAP17612 351 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 TYRP1P17643 537 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 XPAP23025 273 aaPredicted RBP4.33□□□□□ -1.72
MATR3-202ENST00000502422 CD68P34810 354 aaPredicted RBP4.33□□□□□ -1.72
MATR3-202ENST00000502422 IGFALSP35858 605 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 BPIFB3P59826 476 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 SRP54P61011 504 aaKnown RBP4.33□□□□□ -1.72
MATR3-202ENST00000502422 POU6F2P78424 691 aaPredicted RBP4.33□□□□□ -1.72
MATR3-202ENST00000502422 ADARB1P78563 741 aaKnown RBP4.33□□□□□ -1.72
MATR3-202ENST00000502422 BASP1P80723 227 aaKnown RBP4.33□□□□□ -1.72
MATR3-202ENST00000502422 RAD51Q06609 339 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 KCNJ11Q14654 390 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 POLD3Q15054 466 aaPredicted RBP4.33□□□□□ -1.72
MATR3-202ENST00000502422 STK11Q15831 433 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 ATP6AP1Q15904 470 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 HIST2H2ACQ16777 129 aaPredicted RBP4.33□□□□□ -1.72
MATR3-202ENST00000502422 DPY19L1Q2PZI1 675 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 C14orf28Q4W4Y0 310 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 CCNYL2Q5T2Q4 361 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 CERCAMQ5T4B2 595 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 AGAP6Q5VW22 663 aa4.33□□□□□ -1.72
MATR3-202ENST00000502422 RSBN1Q5VWQ0 802 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms