RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 NT5CQ8TCD5 201 aa11.28□□□□□ -0.6
CNOT4-211ENST00000498534 AGAP11Q8TF27 550 aa11.28□□□□□ -0.6
CNOT4-211ENST00000498534 CA5BP1Q8WTZ4 195 aa11.28□□□□□ -0.6
CNOT4-211ENST00000498534 SPOCK3Q9BQ16 436 aa11.28□□□□□ -0.6
CNOT4-211ENST00000498534 VKORC1Q9BQB6 163 aa11.28□□□□□ -0.6
CNOT4-211ENST00000498534 TRIM51Q9BSJ1 452 aa11.28□□□□□ -0.6
CNOT4-211ENST00000498534 DEFB126Q9BYW3 111 aa11.28□□□□□ -0.6
CNOT4-211ENST00000498534 TRIM8Q9BZR9 551 aa11.28□□□□□ -0.6
CNOT4-211ENST00000498534 PPANQ9NQ55 473 aaKnown RBP11.28□□□□□ -0.6
CNOT4-211ENST00000498534 COQ3Q9NZJ6 369 aa11.28□□□□□ -0.6
CNOT4-211ENST00000498534 ZFP69BQ9UJL9 534 aa11.28□□□□□ -0.6
CNOT4-211ENST00000498534 NEU2Q9Y3R4 380 aa11.28□□□□□ -0.6
CNOT4-211ENST00000498534 GOLGA6L10A0A0M3HER8 536 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 KLRC4-KLRK1H3BQV0 150 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 DNAJB6O75190 326 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 GUCA1CO95843 209 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 RNH1P13489 461 aaKnown RBP11.27□□□□□ -0.61
CNOT4-211ENST00000498534 GABRB3P28472 473 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 MLF1P58340 268 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 OLR1P78380 273 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 CATSPEREQ5SY80 951 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 RBM20Q5T481 1227 aaKnown RBP11.27□□□□□ -0.61
CNOT4-211ENST00000498534 ZNF468Q5VIY5 522 aaPredicted RBP11.27□□□□□ -0.61
CNOT4-211ENST00000498534 QSOX2Q6ZRP7 698 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 LRRC8AQ8IWT6 810 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 ZNF295-AS1Q8N0V1 137 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 AGGF1Q8N302 714 aaeCLIP11.27□□□□□ -0.61
CNOT4-211ENST00000498534 KIF2BQ8N4N8 673 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 CPSF7Q8N684 471 aaKnown RBP11.27□□□□□ -0.61
CNOT4-211ENST00000498534 GPATCH11Q8N954 259 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 UTP15Q8TED0 518 aaKnown RBP11.27□□□□□ -0.61
CNOT4-211ENST00000498534 PHF10Q8WUB8 498 aaKnown RBP11.27□□□□□ -0.61
CNOT4-211ENST00000498534 CHTF18Q8WVB6 975 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 SLC5A11Q8WWX8 675 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 FBXL8Q96CD0 374 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 AIF1LQ9BQI0 150 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 TRIM45Q9H8W5 580 aaPredicted RBP11.27□□□□□ -0.61
CNOT4-211ENST00000498534 PRDM9Q9NQV7 894 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 PPT2Q9UMR5 302 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 KLF13Q9Y2Y9 288 aaPredicted RBP11.27□□□□□ -0.61
CNOT4-211ENST00000498534 VWA7Q9Y334 891 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 DYRK1BQ9Y463 629 aa11.27□□□□□ -0.61
CNOT4-211ENST00000498534 ANKRD17O75179 2603 aaKnown RBP11.27□□□□□ -0.61
CNOT4-211ENST00000498534 CSMD2Q7Z408 3487 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 SAGE2PA6NJ88 616 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 A8MUA0 341 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 C3orf80F5H4A9 247 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 C19orf84I3L1E1 186 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 PGRMC1O00264 195 aaKnown RBP11.26□□□□□ -0.61
CNOT4-211ENST00000498534 TFECO14948 347 aaPredicted RBP11.26□□□□□ -0.61
CNOT4-211ENST00000498534 H2AFYO75367 372 aaKnown RBP11.26□□□□□ -0.61
CNOT4-211ENST00000498534 B3GALT4O96024 378 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 ENO2P09104 434 aaPredicted RBP11.26□□□□□ -0.61
CNOT4-211ENST00000498534 TRHRP34981 398 aaPredicted RBP11.26□□□□□ -0.61
CNOT4-211ENST00000498534 PTGS2P35354 604 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 HNF4AP41235 474 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 KIR3DL1P43629 444 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 SCTRP47872 440 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 ITGA8P53708 1063 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 RIPPLY3P57055 190 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 RAB8AP61006 207 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 BTG2P78543 158 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 RBBP5Q15291 538 aaKnown RBP11.26□□□□□ -0.61
CNOT4-211ENST00000498534 NEIL2Q969S2 332 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 SDCCAG3Q96C92 435 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 PDLIM5Q96HC4 596 aaKnown RBP11.26□□□□□ -0.61
CNOT4-211ENST00000498534 OR4K3Q96R72 315 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 RHBGQ9H310 441 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 ZFATQ9P243 1243 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 CORO1CQ9ULV4 474 aaPredicted RBP11.26□□□□□ -0.61
CNOT4-211ENST00000498534 PPP2R2CQ9Y2T4 447 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 KCNE2Q9Y6J6 123 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 F8P00451 2351 aa11.26□□□□□ -0.61
CNOT4-211ENST00000498534 NCOA6Q14686 2063 aaPredicted RBP11.26□□□□□ -0.61
CNOT4-211ENST00000498534 TCRBV16S1A1N1A0A5B0 115 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 USP27XA6NNY8 438 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 ZNHIT1O43257 154 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 SERPINA6P08185 405 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 MAOAP21397 527 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 FNTAP49354 379 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 CLCN2P51788 898 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 HSF1Q00613 529 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 CDSNQ15517 529 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 RNFT1Q5M7Z0 435 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 RNASEH2BQ5TBB1 312 aaKnown RBP11.25□□□□□ -0.61
CNOT4-211ENST00000498534 HECTD2Q5U5R9 776 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 TMEM211Q6ICI0 200 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 NXPE4Q6UWF7 544 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 C3P1Q6ZMU1 363 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 GALNT7Q86SF2 657 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 THOC6Q86W42 341 aaKnown RBP11.25□□□□□ -0.61
CNOT4-211ENST00000498534 SULF2Q8IWU5 870 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 CNTN4Q8IWV2 1026 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 TMEM156Q8N614 296 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 NFAM1Q8NET5 270 aaPredicted RBP11.25□□□□□ -0.61
CNOT4-211ENST00000498534 C14orf79Q96F83 325 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 CERS2Q96G23 380 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 FAR2Q96K12 515 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 TSNARE1Q96NA8 513 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 CCDC77Q9BR77 488 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms