RNA–Protein interactions for RNA: ENST00000497715.1

CUL3-212, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 2,400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-212ENST00000497715 FOXRED2Q8IWF2 684 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 UBQLNLQ8IYU4 475 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 MFSD4AQ8N468 514 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 TSPYL6Q8N831 410 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 KYQ8NBH2 561 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 PAPD5Q8NDF8 572 aaKnown RBP4.87□□□□□ -1.63
CUL3-212ENST00000497715 GPRC5AQ8NFJ5 357 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 NSUN4Q96CB9 384 aaKnown RBP4.87□□□□□ -1.63
CUL3-212ENST00000497715 CELF6Q96J87 481 aaKnown RBP4.87□□□□□ -1.63
CUL3-212ENST00000497715 HSFY1Q96LI6 401 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 SAMD8Q96LT4 415 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 C12orf66Q96MD2 445 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 CELF4Q9BZC1 486 aaKnown RBP4.87□□□□□ -1.63
CUL3-212ENST00000497715 SLC5A7Q9GZV3 580 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 PRO1933Q9H354 126 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 TRABDQ9H4I3 376 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 CNTD2Q9H8S5 307 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 RDH8Q9NYR8 311 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 UBP1Q9NZI7 540 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 MTCH1Q9NZJ7 389 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 EPHA6Q9UF33 1036 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 IL17BQ9UHF5 180 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 PURGQ9UJV8 347 aaKnown RBP4.87□□□□□ -1.63
CUL3-212ENST00000497715 DKKL1Q9UK85 242 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 SLC27A6Q9Y2P4 619 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 RNF11Q9Y3C5 154 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 HSPB11Q9Y547 144 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 RNF215Q9Y6U7 377 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 CHD4Q14839 1912 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 USP47Q96K76 1375 aa4.87□□□□□ -1.63
CUL3-212ENST00000497715 LGALS16A8MUM7 142 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 ZNF263O14978 683 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 MID1O15344 667 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 DEAF1O75398 565 aaPredicted RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 WBP4O75554 376 aaKnown RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 SEC14L2O76054 403 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 KAT7O95251 611 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 PCCBP05166 539 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 ENO1P06733 434 aaKnown RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 SRPRAP08240 638 aaKnown RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 H2AFB1P0C5Y9 115 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 SLC35G4P0C7Q5 338 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 RRASP10301 218 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 DRD5P21918 477 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 PCMT1P22061 227 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 CPT2P23786 658 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 HOXA13P31271 388 aaPredicted RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 MMP12P39900 470 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 NAA10P41227 235 aaPredicted RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 ELAVL2Q12926 359 aaKnown RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 GAGE1Q13065 139 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 SEMA5AQ13591 1074 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 ATP13A5Q4VNC0 1218 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 SOWAHCQ53LP3 525 aaPredicted RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 EXOSC6Q5RKV6 272 aaKnown RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 CERCAMQ5T4B2 595 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 FAM46CQ5VWP2 391 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 FBXW9Q5XUX1 488 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 MRNIPQ6NTE8 343 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 MED25Q71SY5 747 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 ZNF572Q7Z3I7 529 aaPredicted RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 ALYREFQ86V81 257 aaKnown RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 KMT5CQ86Y97 462 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 ARHGAP12Q8IWW6 846 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 NRMQ8IXM6 262 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 SPAG16Q8N0X2 631 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 SYNE4Q8N205 404 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 DHRSXQ8N5I4 330 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 FAM47BQ8NA70 645 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 ST6GALNAC3Q8NDV1 305 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 ADPRHL1Q8NDY3 354 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 ELMO1Q92556 727 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 ZNF599Q96NL3 588 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 PIMREGQ9BSJ6 248 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 WDR11Q9BZH6 1224 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 NIF3L1Q9GZT8 377 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 EPHX3Q9H6B9 360 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 FKRPQ9H9S5 495 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 CARS2Q9HA77 564 aaKnown RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 LPAR2Q9HBW0 351 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 ZNF334Q9HCZ1 680 aaPredicted RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 MMP25Q9NPA2 562 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 C11orf16Q9NQ32 467 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 TREX1Q9NSU2 369 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 RNF146Q9NTX7 359 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 FAM217BQ9NTX9 383 aaPredicted RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 FAM118AQ9NWS6 357 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 NPAP1Q9NZP6 1156 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 CXXC1Q9P0U4 656 aaPredicted RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 TCFL5Q9UL49 500 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 TBL2Q9Y4P3 447 aaKnown RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 ARAP3Q8WWN8 1544 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 TMEM2Q9UHN6 1383 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 A0A1W2PQ09 198 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 A0A1W2PQ45 241 aaPredicted RBP4.86□□□□□ -1.63
CUL3-212ENST00000497715 RPS10-NUDT3A0A1W2PQS6 291 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 A0A1W2PQY0 241 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 FABP12A6NFH5 140 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 MROH6A6NGR9 719 aa4.86□□□□□ -1.63
CUL3-212ENST00000497715 FBLL1A6NHQ2 334 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms