RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SLC37A3Q8NCC5 494 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 LPCAT1Q8NF37 534 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 OR7A2PQ8NGA2 310 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 OR10V1Q8NGI7 309 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 SLC13A3Q8WWT9 602 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 RFT1Q96AA3 541 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 ZNF501Q96CX3 271 aaPredicted RBP3.27□□□□□ -1.89
CLK1-214ENST00000496205 RBM18Q96H35 190 aaKnown RBP3.27□□□□□ -1.89
CLK1-214ENST00000496205 FAM218AQ96MZ4 157 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 SPATA13Q96N96 652 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 TSSK2Q96PF2 358 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 FAM111AQ96PZ2 611 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 PRMT1Q99873 361 aaKnown RBP3.27□□□□□ -1.89
CLK1-214ENST00000496205 ANP32EQ9BTT0 268 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 UBQLN3Q9H347 655 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 LIN28AQ9H9Z2 209 aaKnown RBP3.27□□□□□ -1.89
CLK1-214ENST00000496205 RNPEPL1Q9HAU8 725 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 PRMT8Q9NR22 394 aaPredicted RBP3.27□□□□□ -1.89
CLK1-214ENST00000496205 TMEM161AQ9NX61 479 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 SPG21Q9NZD8 308 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 CTNNA3Q9UI47 895 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 STX8Q9UNK0 236 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 AURKCQ9UQB9 309 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 KCNK6Q9Y257 313 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 TMED7Q9Y3B3 224 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 TRAV18A0A075B6X5 111 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 TRBV4-1A0A0J9YWV2 114 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 RGSL1A5PLK6 1076 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 SRRM4A7MD48 611 aaKnown RBP3.26□□□□□ -1.89
CLK1-214ENST00000496205 PMS2P5A8MQ11 134 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 NPIPA3F8WFD2 350 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 GLRA3O75311 464 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 CDC123O75794 336 aaPredicted RBP3.26□□□□□ -1.89
CLK1-214ENST00000496205 CDK2AP2O75956 126 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 LETM1O95202 739 aaPredicted RBP3.26□□□□□ -1.89
CLK1-214ENST00000496205 CLPTM1O96005 669 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 AMBPP02760 352 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 ALPPP05187 535 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 PRSS56P0CW18 603 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 CCDC192P0DO97 292 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 ALPPL2P10696 532 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 KRT13P13646 458 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 RBMS1P29558 406 aaKnown RBP3.26□□□□□ -1.89
CLK1-214ENST00000496205 CTNNB1P35222 781 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 SFTPDP35247 375 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 ACAA2P42765 397 aaKnown RBP3.26□□□□□ -1.89
CLK1-214ENST00000496205 ATXN3P54252 364 aaPredicted RBP3.26□□□□□ -1.89
CLK1-214ENST00000496205 CSNK2BP67870 215 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 ARHGAP1Q07960 439 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 GAMTQ14353 236 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 TAF13Q15543 124 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 GTDC1Q4AE62 458 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 FFAR4Q5NUL3 377 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.26□□□□□ -1.89
CLK1-214ENST00000496205 ARHGAP17Q68EM7 881 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 KCTD11Q693B1 232 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 FUT10Q6P4F1 479 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 SLC25A47Q6Q0C1 308 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 PRSS42Q7Z5A4 293 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 PHLDB2Q86SQ0 1253 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 PRUNE1Q86TP1 453 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 CCDC60Q8IWA6 550 aaPredicted RBP3.26□□□□□ -1.89
CLK1-214ENST00000496205 KIAA1524Q8TCG1 905 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 CD99L2Q8TCZ2 262 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 CKAP2Q8WWK9 683 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 ANKRD9Q96BM1 317 aaPredicted RBP3.26□□□□□ -1.89
CLK1-214ENST00000496205 BTBD9Q96Q07 612 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 PRAM1Q96QH2 718 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 CDCA3Q99618 268 aaPredicted RBP3.26□□□□□ -1.89
CLK1-214ENST00000496205 CRACR2AQ9BSW2 395 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 GPR173Q9NS66 373 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 MAN2C1Q9NTJ4 1040 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 NINJ2Q9NZG7 142 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 TMEM181Q9P2C4 612 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 EPHA6Q9UF33 1036 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 FETUBQ9UGM5 382 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 PILRBQ9UKJ0 227 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 RPH3AQ9Y2J0 694 aaPredicted RBP3.26□□□□□ -1.89
CLK1-214ENST00000496205 SMAD5-AS1Q9Y6J3 95 aa3.26□□□□□ -1.89
CLK1-214ENST00000496205 PFASO15067 1338 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 A0A087WUV0 522 aaPredicted RBP3.25□□□□□ -1.89
CLK1-214ENST00000496205 TRBV2A0A0J9YWF9 115 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 A0A1W2PR80 420 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 K7EPI3 171 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 ZNF195O14628 629 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 RASGRF2O14827 1237 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 MCF2LO15068 1137 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 KIF5CO60282 957 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 PEX11AO75192 247 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 SEC24AO95486 1093 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 GJB2P29033 226 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 MAGEA11P43364 429 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 LEPRP48357 1165 aaKnown RBP3.25□□□□□ -1.89
CLK1-214ENST00000496205 TDO2P48775 406 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 SMSP52788 366 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 CASP9P55211 416 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 BTG1P62324 171 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 KCNJ10P78508 379 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 ZNF74Q16587 644 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms