RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 MAP4K2Q12851 820 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 ZNF846Q147U1 533 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 DPY19L1Q2PZI1 675 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 ARMC4Q5T2S8 1044 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 GCNT6Q5T4J0 391 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 DGLUCYQ7Z3D6 616 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 PTRH1Q86Y79 214 aaKnown RBP12.92□□□□□ -0.34
GPC1-209ENST00000495100 TCEANCQ8N8B7 351 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 OR2A12Q8NGT7 310 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 CMTM7Q96FZ5 175 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 UHRF1Q96T88 793 aaPredicted RBP12.92□□□□□ -0.34
GPC1-209ENST00000495100 CPPED1Q9BRF8 314 aaPredicted RBP12.92□□□□□ -0.34
GPC1-209ENST00000495100 WDR90Q96KV7 1748 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 PRAMEF33A0A0G2JMD5 474 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 EFCAB10A6NFE3 127 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 ZNF860A6NHJ4 632 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 LOC110117498-PIK3R3F6TDL0 507 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 WNT9AO14904 365 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 PENKP01210 267 aaPredicted RBP12.92□□□□□ -0.34
GPC1-209ENST00000495100 HTR1AP08908 422 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 FPR1P21462 350 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 NR4A2P43354 598 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 SLC6A11P48066 632 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 SOX9P48436 509 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 PPIGQ13427 754 aaKnown RBP eCLIP12.92□□□□□ -0.34
GPC1-209ENST00000495100 PRSS36Q5K4E3 855 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 RBM48Q5RL73 367 aaKnown RBP12.92□□□□□ -0.34
GPC1-209ENST00000495100 XAF1Q6GPH4 301 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 RIMKLAQ8IXN7 391 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 AADATQ8N5Z0 425 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 OR10G6Q8NH81 332 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 ZCCHC10Q8TBK6 192 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 SH3YL1Q96HL8 342 aaPredicted RBP12.92□□□□□ -0.34
GPC1-209ENST00000495100 MUC13Q9H3R2 512 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 CLCA2Q9UQC9 943 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 MYLKQ15746 1914 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 H0YAE9 185 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 GFRA2O00451 464 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 TLX2O43763 284 aaPredicted RBP12.92□□□□□ -0.34
GPC1-209ENST00000495100 WISP3O95389 354 aaPredicted RBP12.92□□□□□ -0.34
GPC1-209ENST00000495100 ZNF8P17098 575 aaPredicted RBP12.92□□□□□ -0.34
GPC1-209ENST00000495100 LIPAP38571 399 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 AVPR1BP47901 424 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 RELAQ04206 551 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 PSRC1Q6PGN9 363 aaPredicted RBP12.92□□□□□ -0.34
GPC1-209ENST00000495100 OR4N5Q8IXE1 308 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 SVOPQ8N4V2 548 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 DPP10Q8N608 796 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 FAM83FQ8NEG4 500 aaPredicted RBP12.92□□□□□ -0.34
GPC1-209ENST00000495100 ZNF480Q8WV37 535 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 TANKQ92844 425 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 CCM2Q9BSQ5 444 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 SLC52A3Q9NQ40 469 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 GIN1Q9NXP7 522 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 TRPS1Q9UHF7 1281 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 MRPS7Q9Y2R9 242 aaKnown RBP12.92□□□□□ -0.34
GPC1-209ENST00000495100 DYTNA2CJ06 578 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 OR52A4PA6NMU1 304 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 M0R3H8 397 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 CTDSP2O14595 271 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 APOA1P02647 267 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 C9P02748 559 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 MYOGP15173 224 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 MAPK8P45983 427 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 CAV3P56539 151 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 PFN3P60673 137 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 PPP2R2BQ00005 443 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 SRSF11Q05519 484 aaKnown RBP12.91□□□□□ -0.34
GPC1-209ENST00000495100 RUNX1T1Q06455 604 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 LASP1Q14847 261 aaKnown RBP12.91□□□□□ -0.34
GPC1-209ENST00000495100 SUSD6Q92537 303 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 CLIP3Q96DZ5 547 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 SLC12A9Q9BXP2 914 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 SLC9A8Q9Y2E8 581 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 SIP14410 1827 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 CBFA2T3O75081 653 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 FCER2P06734 321 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 BMP4P12644 408 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 CAMK1Q14012 370 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 ZNF385BQ569K4 471 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 C8orf82Q6P1X6 216 aaPredicted RBP12.91□□□□□ -0.34
GPC1-209ENST00000495100 TRAF7Q6Q0C0 670 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 GPR149Q86SP6 731 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 TRIM48Q8IWZ4 208 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 UCN3Q969E3 161 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 GLYATL1Q969I3 302 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 CCDC177Q9NQR7 707 aaPredicted RBP12.91□□□□□ -0.34
GPC1-209ENST00000495100 CUEDC1Q9NWM3 386 aaPredicted RBP12.91□□□□□ -0.34
GPC1-209ENST00000495100 PCDHGA10Q9Y5H3 936 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 GVINP1Q7Z2Y8 2422 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 KRT8P05787 483 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 PRR35P0CG20 571 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 JUPP14923 745 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 IFI44LQ53G44 452 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 LIPKQ5VXJ0 399 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 BRAT1Q6PJG6 821 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 TMEM145Q8NBT3 493 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 ADAMTS19Q8TE59 1207 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 SLC9A6Q92581 669 aa12.91□□□□□ -0.34
GPC1-209ENST00000495100 ABHD8Q96I13 439 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms